Crassostrea gigas (Pacific oyster): 105335421
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Entry
105335421 CDS
T03920
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105335421
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
ig
Neogenin_C
Pur_ac_phosph_N
V-set
Interfer-bind
C2-set_2
NDNF
Ig_6
TM_ErbB1
Shisa
Mid2
EphA2_TM
Protocadherin
PD40
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
105335421
NCBI-ProteinID:
XP_034321559
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All DBs
Position
LG2:17794174..17832744
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AA seq
1485 aa
AA seq
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MDLTERSKRTVLSCVVTFAVVCLKCVHATTSFTELTFLEEPSDLVVSRGNAATLHCSVQS
EAGMPNVIWMKDGKPLGLDDQNILWPNGSLHITNVDGSNRGLYQCMATLPQTGAIISRFA
SLHTAYLSRNFIREPQDLTIYLQEVAMFECEGDGLPAPNVTWYKDNSLLRDFKPNILVYP
DGVLEINPVEFSDFGTYYCQVENTERARSSRLAKLEQNGNTDSFDDGTAPWFVATPRDTS
IPEGSSTILFCGANGFDTLRKKPEITWLKDGETIIFNSTQGRLKLKGAGSLQIFNVQPFD
AGTYSCRSNNLEDSIDAEATLTVLVRPHFETKPQSVKAYEKTEAIFNCKLKGSPAPEVRW
TKDGLPLQESNYIIENEDHLRIMGLVTSDSGYYQCHGSNELGSIQAIAQLVVLPNTLATL
TDRYSYGGQRSPPSKPTGLAAAIVSKRFITLRWDKDDDGGTTGYTVFWREQGSLRERMLN
TTQPEATLQRLNPDSRYQIQVRAFNRFQYSWSYASIEVDTEKDVAVPSPPVNIRVTPQSP
ESILVTWDPPLQPKGQILKYLLSYEDAHGSPKQIEVLDTRKLLTGLMAFRTYTIRVVAVN
ENGEGMSTREMTTKTYSDKPSEPPQNATLETASSTSLIVRWEPPPREHQNGKITGYKIRY
KMKGASRNGATVTTDGNRRLYALTNLEKMTEYQVRISALTVNGSGPLTPKLKATTYEDDL
DESRVPDAPRTVTVTPHATSIRVSWTTPPPEKKIVVRGYVLGWGKGVPDSEKKVLGPDTQ
IYTIENLIPSSEYVITVRAMNNKGEGLTRYTTAITTKESVEETLIPLFPPVGLKTMVLSS
STIVLTWTDTSIGPSQKLLDNRYYTVRYRLATEAENDNNRYWYLNSTDLNAHIDHLRPNT
KYEFDVKITKGRSVSPWSMKESNKTMEDVPATAPVDLTPVPKKNDPRAVIMNWQPPAKPN
GQITGYLVFYTTDPKQDLREWVVDGVLEGDELSATIKRLTPSTTYYFKVQARNSKGYGPL
SETVIYKTPQADGSGGGQIDPEYPRISPGGKGTMPDLSEDPKKTSVGGNGNSRDSEGRRG
SNSESGLPTGIMNIIIASVVGAAFCVIIIVIAVIYCKRRDNEQRLKRQAQQNQQSPVKGK
GQGRDLKPPDLWIHDNMEMKNIDKGQRSESTLTMSTTRRSSNDYRSMDDLPPYHEDRNEM
YYHPPSDHDERERFLPPRQPGPGIIRPKATKPLMIPVDAQPPPREPIAMVTALPNGALNP
NLDRGEPGVMSRPGFPRTQYNMQYTSGGPRVNAGDLPQPPPIQAYPIDYAYKRPIYDEDD
TSSLHSCHDDRSFSSRSIGYGQKPPDCHSLGQGQPMAVIAPGQHEFDGHRSLPRGNRPMR
SFTSPNPHNQSNLFSGVHHHSTPKHQIVKPQQSPYKKAGPPLTSAPIKPRAIPVIKPKAP
DVVLKAGVDPDIQKSESTEELSAEMANLDCLMKDLNAITQQNFEV
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaccgaaagaagtaaacggacagttttgtcctgtgttgttacttttgcagtc
gtgtgtttaaagtgtgtacatgcaacgaccagttttaccgagctcacattcctagaggag
cccagcgacctggtggtttccaggggcaatgccgccacgcttcactgctccgtccaatca
gaagcaggaatgcccaacgtcatttggatgaaggacgggaaacccctgggtcttgacgat
caaaatattctttggccaaacggatctcttcacatcaccaatgtcgatggttcaaatcgg
ggtctgtatcagtgcatggccactctcccccagaccggggccatcatcagccgcttcgcc
agcctacacacagcttatctctctagaaacttcatccgcgaacctcaggacctcacgatt
tacctccaagaggtagccatgtttgaatgtgaaggtgatggactgcccgcccccaatgtc
acatggtacaaagacaacagccttctccgagacttcaagcccaacatcctggtgtatcca
gatggagttctggaaattaaccccgtggaattctcggacttcggcacgtattactgccag
gtggaaaacacggagagagccaggagtagccggttagccaagctcgagcagaacggaaat
acagattcctttgatgacggcaccgcaccgtggttcgtggcgaccccccgagacaccagt
atcccagaaggctcctccaccatcctgttctgtggggccaatggcttcgacaccctgagg
aaaaagcctgaaattacctggcttaaagatggagaaaccatcatcttcaatagcacccag
ggtcgtctcaagttgaagggggcgggcagcttgcagatattcaatgtccagccctttgat
gctgggacctactcctgtcgttccaataacctagaggactctatagacgccgaggccacc
ctcactgtgttagttcggcctcattttgagaccaaaccacagagcgtcaaggcatacgag
aaaacagaggccatctttaattgtaaactcaagggttccccagcgccagaggtccgatgg
acgaaagatggactcccgctacaggagtctaattacatcatcgaaaacgaagaccacctg
aggattatgggattggtgacctctgacagtggatattatcagtgtcacggcagcaacgag
ctaggaagcatccaggcaatagctcagcttgttgtgctacctaacacactggccactctc
acagacaggtattcctatggaggacagaggagcccgccctcaaagcccactggtctagcg
gctgccattgtgtccaagcggttcatcacactccgatgggacaaagatgatgatgggggg
accacggggtacactgtattctggagggagcagggctctctcagagaacgtatgctgaat
accacacagcctgaggctacactccagaggcttaatccagactccagatatcagatccag
gtacgggccttcaacagattccagtacagctggagctatgcaagcatcgaagttgacacc
gaaaaagatgtggcggtgccaagtccaccggtcaacattcgagtgacgccacagtcccca
gagtccatcctggtaacttgggacccacctctacagcccaagggacagattctgaagtat
ctcctcagctatgaggacgctcacggatcacccaaacagattgaggtgttggacaccaga
aaacttctgacaggtttgatggcattccgaacctacacaatccgtgtggtggctgtgaat
gaaaatggggaagggatgagcacaagggaaatgaccacaaagacgtactcagacaaaccg
tcagaaccaccacaaaacgccacgcttgaaaccgcaagttctacgtcactcattgtgcga
tgggaacctccccctcgggagcaccagaacgggaaaatcacaggctacaagatccgctac
aagatgaaaggcgcctccagaaacggagccaccgttaccacggatgggaaccgccgtctg
tacgccctcactaacctggagaagatgacagagtaccaggtgcggatctcagctctgacc
gtcaacgggagtggaccactgactcccaaactgaaggccaccacctatgaagatgatttg
gatgagtctagggtacctgatgcccctcgcacagtgactgtgacccctcatgcgacctcc
attcgagtttcgtggaccacccctcccccggagaagaagatcgtggtgcggggctacgtc
ctggggtgggggaaaggtgttccggactcggagaagaaagtccttgggcctgatacccaa
atatacacaatagagaacctcattccttcctccgagtacgtgattacggttcgcgccatg
aacaacaaaggggagggattgacccgctacaccacagcaatcaccaccaaggagtccgtg
gaggagacgctcattccactgtttcccccggtgggtctgaagacgatggttttgtcctcg
tccaccattgttctgacctggaccgacacatcgattggccccagtcagaaactgctggac
aatcgttattatactgtcagatatcgtctggcaacggaggcggaaaatgacaataacagg
tactggtacctgaactcgacggacctgaacgctcatatagaccacctacgtcccaacact
aagtacgagtttgacgtcaagatcacgaaggggcggagcgtgagtccatggagcatgaag
gagtctaacaaaaccatggaggatgttcctgctacagcccctgtagatctgaccccggtc
cccaagaagaacgacccccgggcagtcatcatgaactggcagccccctgctaaacccaac
ggacaaatcacagggtacctagttttctacacgacggacccaaagcaggacctgcgtgag
tgggtggtagatggggtcctcgagggggatgagctgtcggcgaccatcaaacgcctcacc
ccctcaaccacatactacttcaaggtccaggcacgcaacagcaagggttacggtccgctg
tctgagaccgtcatctataaaacacctcaagcggacggaagtggtggtggccagattgat
ccggagtatccacggattagtcccggtgggaaagggacaatgcccgatttgtccgaggac
ccgaaaaaaaccagcgtgggaggtaacggaaatagtcgagacagtgaggggagaaggggc
agtaactcagagagcggtctgcccaccggcatcatgaacattatcatcgcctctgtggtg
ggggcggcattctgtgtcatcatcatcgtcatcgctgtcatttactgtaagagaagagac
aacgaacaaaggctcaaacgccaagctcaacaaaaccagcagtctcctgtgaaaggcaaa
ggtcagggtcgtgacctaaagccccctgacctctggatccatgacaacatggagatgaag
aacattgacaaaggtcagaggagtgagagtacgctgaccatgagcaccacgcggcgaagc
tccaacgactaccgctcaatggacgacctgccaccctaccacgaggacagaaatgaaatg
tactaccatccaccctctgatcacgatgaaagagagaggttcctgcccccaagacaaccc
ggtcctgggataattcgccccaaggcaacaaaacccttaatgattccagtggatgctcaa
cctccacctagggaacccattgcaatggtgacagctttacctaatggagcgctcaacccg
aacctggatcggggagagccgggggtaatgtctcggccaggattcccccggactcagtac
aacatgcagtacacaagtgggggaccaagagtcaacgccggggatcttccccagccacca
ccaattcaagcctacccgatagattatgcatacaagcgtcccatttatgatgaagatgac
acatccagcctgcatagttgtcatgacgaccgttccttttccagtagatccattggttat
ggccagaagccccctgactgtcattccctaggtcaaggccaaccaatggccgtcattgcg
ccaggacagcacgagttcgacggccaccgcagtctgcccagaggaaaccgaccaatgaga
agcttcacatccccaaacccccataaccaatcaaatctcttctcaggggttcatcaccat
agcaccccaaaacatcagatagtcaagccccagcagtctccctataagaaggccgggcct
cctctcacctctgctccaatcaaaccccgtgccatacctgttataaagcccaaagctcca
gacgtcgtgctgaaggccggagtagatccagacatacagaagtcagaaagtactgaggaa
ctttcagcagaaatggctaatttggattgtctgatgaaagatctgaatgccataacgcag
caaaactttgaggtttag
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