Magallana gigas (Pacific oyster): 105344080
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Entry
105344080 CDS
T03920
Name
(RefSeq) macrophage mannose receptor 1
KO
K06560
mannose receptor, C type
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105344080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105344080
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
105344080
04090 CD molecules [BR:
crg04090
]
105344080
04091 Lectins [BR:
crg04091
]
105344080
Membrane trafficking [BR:
crg04131
]
Endocytosis
Phagocytosis
C-lectin receptors
105344080
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
105344080
CD molecules [BR:
crg04090
]
Proteins
105344080
Lectins [BR:
crg04091
]
C-Type lectins
Group 6: Mannose receptor family
105344080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
UL45
Kringle
EGF
hEGF
EGF_2
Peptidase_A4
Mid2
TMEM154
Orf78
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
105344080
NCBI-ProteinID:
XP_034324899
LinkDB
All DBs
Position
LG3:complement(25495774..25522008)
Genome browser
AA seq
1747 aa
AA seq
DB search
MLYFVTFLFLSSIKGDVSAEDCYRTKLGRGYNGKVNVTASGKDCQPWGSHLPHAHNFTWL
WTEENFCRNPDDRANGPWCYTMDPETVLESCGISQCTTEFDPCMMKPCQNGGICISRGVR
QSPYYSCVCDAKWTGQDCQTKVSQCQYKPCKNGATCIDLKDDFMCRCTTDYVGKICDLRV
GLCDTENGWQRFGSNCYRLINGTKASWNDAINLCGELDASLPVIDSPEIQTEANDFAKLK
KANFWTGISNDGSVYFTRNYYSSEHLELNITNFYWHKLQRSRRKDGLCVMLKYPDNIHVT
NHGNWFPIQCSYLNDVVCSKPVGTCPRGWFFHISKCYKMLDDWQSTWMKASDHCRTLNST
LLEITSDAEQNFMQTFLQRQRSGIGNDGKFWLNLRRQSAPAQKYWAWESSKHKAALYTKL
STNTAALGECAYMDIDRNGTWLSDDLCSASFGVVCSYDVGSRNWIANKEMDAHKDLNDRQ
SSCGKGWIDWTDGSESSCFFLITELLTWEAAEYKCQQMGGHLISIDDNAEQAFIAGLLRF
EAADGSVWIGANCREEGVGYQWTDGEPFVYYNWFPDEPDHVIDGDEDCVAMFISNAKWTD
RPCGQLHPGICEKSSIGTSDSETESNEIQKTIVVDEYCPNGWVPYKDNCFLIKKNTTTWD
EADTICRRQGADLASISDRVEQYLVFSQLSEDSISANYGFWIGLRDRKDQTFRWADDSDV
TYVKWQSSEPQGFTPYKQGCTYISFYNGLWADKACESYMPGYVCKMKKQRNGAGDKLPFS
EGCDRDYVGYEGLCYKVFATPKTWDGAKMFCKSHKGSLATISSLHVSSFLASHLGNVYSV
GLRAWIGYSANQNTSSWSSGKTPLLRQTFLNFATNSTRRCGFLHTSLLLALGLCQEKHYF
ICEKQRAGYLPNSSTITLNSNPTQEIICPHGWYKHNNNCYKEFLQTLPWTKARKHCRSLG
GRLVSIQDERDVDFVYNTFKGIIKTDWWVGYNRRDSTKVWHWSDSPENQFSPLNSGSGIQ
NCALMLQSNGMFKQDNCILHYPYVCEAQSVSSVLSYLDNKTQEKCNESGYFLHDKFCYSI
NETKMSYVSAQRICQMRGSELASIHNNMELEFILSLQKNYDFENELWIGLRKVRERGIER
WQWSDNSSLDFAYWRNNELTTSQRSRDCTVLFSIEGKWENRNCLTERGFICKKETSLKKS
PSSVVVKSEFIVGGCPLPYVSSPINDKCYLLNETQTTWKTANSTCNSLGGSLLAIQNQLE
QDYILSLVNLKTPGLWIDLNRLEGETFRNQNNKPLLFTNWDRNQPKSQQRVQPLELRGSL
QYKEDCVQMYTGTVGSRIGRWIVKSCSENNAFFICEKQKDSSISYAKRDSVCPPDYEQFG
KSCYMFHAVPENVDSAQKNCQRHNNGRLVSVTSVYEYGFVRGMTAQVNLNSHWIGLRRSN
DTVLYRWTDGNPYLFSHWNDSEPSQQPNEECVISLNGMWMDVPCTNEYPYLCEVSSVKAE
IRSPPKCMPLFGIAYDGACYYVQNQGKNSWKDAHQKCKSHGMDLVSIHSAKELETLQTTV
ARMAQTIVWIGLTNVRKASDMFQRGVYWYWSSGEEVSYTNWGEFEPSENILNSDEGCVYM
DTSGFWHDDSCSNEYAFICKHYGSFSDLKTIRDNSGKSNDSNPHFQNNQMYRESVESHRQ
SPVNQSKDQKTNNTSAVVGVSVGVSILIILIIAVIIFVTYKKKYRWYPRMSLGFSNAMYR
RDIDESY
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgctgtattttgtgacatttctgttcctgtccagtataaaaggcgatgtatcggcggaa
gactgttaccgaacgaaactcgggcgcggatacaacgggaaagtgaacgtcacagcgtcc
gggaaagactgtcagccgtgggggtcacatctaccccacgctcacaacttcacgtggttg
tggacggaggagaatttctgcagaaacccggatgaccgtgcgaacggtccctggtgctac
accatggatccggaaacggtgttggaaagttgcgggatatcccaatgcacgacagaattt
gacccttgtatgatgaaaccttgtcaaaacggcgggatatgtataagtcgtggggtcagg
cagtccccttattacagctgtgtgtgtgacgcaaagtggacgggacaggattgtcaaact
aaagtttcccagtgtcaatacaagccgtgtaaaaatggcgctacgtgcattgatctcaaa
gatgatttcatgtgtcgctgtaccacagactacgttggaaaaatatgtgacctgagagta
ggtctctgtgacacagaaaacggctggcaacgctttggaagcaactgttataggttgatc
aacggcaccaaagcctcatggaatgacgccataaacctctgtggagagttagatgctagt
ctcccggtgattgattccccagagattcaaacagaagccaatgatttcgccaaactaaag
aaagccaatttttggacagggatcagcaacgatggttctgtgtatttcactagaaattat
tattcatctgaacacctcgaactgaacatcactaacttttattggcacaaactacaacgg
tctcgaagaaaagatggtttgtgtgtaatgctaaagtatccagacaatatacacgtaact
aaccatggaaattggtttcccattcagtgctcctatctgaatgatgttgtttgcagtaaa
cctgtcggaacatgtccaagaggctggtttttccacatcagcaagtgttataaaatgtta
gacgactggcagtcaacgtggatgaaggcgagcgaccattgcagaacactgaattctact
ctgctggagatcacaagtgatgcagagcaaaattttatgcaaacattcttacaacggcaa
cgatctggaatcgggaacgacgggaaattttggctgaatctaagacgccaaagtgcccca
gcacagaaatattgggcttgggaatcatcaaaacacaaggcagccttatacacaaaactg
tcaactaacacagccgcgttaggagagtgtgcctacatggatatagataggaacggaacc
tggttgtcggacgacttgtgttcggcatcttttggtgtggtctgtagctatgatgtagga
tcgcgaaactggattgccaacaaggaaatggatgcacataaagatctgaacgaccgacag
tcttcatgtggtaaaggatggattgactggactgacggctcggagtcctcgtgctttttc
ctgatcaccgaacttttgacttgggaagctgcagaatacaaatgtcagcaaatgggagga
caccttataagcatcgacgacaacgcagagcaagcttttatcgccggtcttttgaggttt
gaagcggctgatggttctgtctggattggagctaactgtcgagaagaaggggttggatac
caatggacggacggcgaaccttttgtttattacaactggtttccagatgagcccgaccac
gtgatcgacggagacgaagattgtgtcgccatgtttatatctaatgcaaaatggaccgac
agaccatgtgggcagttgcatccaggcatttgcgagaaatcaagcattggtacatcggat
tctgagacagaatcaaatgaaatacaaaaaacaatagttgttgatgaatattgtccaaat
ggatgggtaccatacaaagacaactgcttcttgattaagaaaaacacaacaacctgggac
gaagcagacaccatatgtcgccgacaaggcgcagatcttgcctcaatttcagatcgcgtg
gaacaatacctggtgttcagtcaactttctgaagattctatatccgccaattatggattt
tggattggtctccgcgatagaaaggatcaaactttccgatgggcagacgacagtgacgtc
acatatgttaaatggcagagtagtgaaccacagggattcaccccttacaaacaagggtgt
acatatatcagcttttataatggactttgggctgataaagcttgtgaatcttatatgcct
ggatatgtttgtaaaatgaaaaagcaaagaaatggggctggagataaattgcctttttca
gaagggtgtgaccgggactacgttggatatgagggcctatgttataaagtatttgccacc
cctaagacatgggatggtgcaaaaatgttttgtaaatcacataaaggtagcctagcaacg
atcagttcactacacgtatcaagttttctggccagtcaccttgggaacgtgtactctgtc
ggtttgagggcctggattggctacagtgcgaaccaaaatacaagttcttggtcaagtggg
aaaactccattgttacggcaaacatttttgaattttgcaactaattctacacgaaggtgt
ggctttttgcacacatcgctgctattggctctaggtctttgtcaggaaaagcattacttt
atatgtgagaaacagcgtgcagggtacctacctaattcttccaccataacccttaactcg
aacccaacacaggaaattatctgccctcatggctggtacaagcataacaacaactgttat
aaggaatttttacaaacacttccatggacaaaagcacgaaaacattgcagaagtttagga
ggtcgtctggtttcaatacaagatgagagagatgtcgattttgtttacaatacgttcaaa
ggcatcattaaaacggattggtgggttggatataacagaagagactctactaaagtttgg
cattggtctgacagtcctgagaaccaattttctccattaaattctggaagtggaatccag
aattgcgcattaatgcttcaatcaaatgggatgttcaagcaagacaattgtatattacat
tatccttatgtatgcgaagcccagtcagtatcttcagtactgagttaccttgacaacaaa
acgcaagaaaaatgtaacgagagtggatatttcttgcacgacaagttttgttattccatc
aacgaaacgaaaatgtcgtacgtttctgctcagagaatctgtcaaatgcgcggatcggaa
ttagcaagcatccacaacaatatggagttggaattcatcttgtcacttcaaaagaattat
gattttgaaaatgaattatggattggactaagaaaagttagagaacgtggaattgaaaga
tggcagtggtcggacaattcttcccttgactttgcctactggagaaacaacgaattgacc
acaagtcaaagaagtagagactgtaccgttctatttagcattgaaggaaaatgggagaat
aggaactgtcttaccgaaagaggatttatttgtaaaaaagaaacttcattgaagaagtcg
ccatcttctgttgttgtaaaatctgaatttattgttggtggttgtcccttaccatatgtt
tcctcgcctataaatgataaatgctatctattgaatgaaacacaaacaacctggaaaact
gctaatagcacttgcaactcattaggaggttccctgttagccatacaaaatcaactggaa
caagattatatattgagtttggtcaatctgaaaacgcctggattatggatcgatctaaat
agattggagggagaaacattccggaaccaaaacaacaagcctttgctgtttacaaactgg
gataggaatcaaccaaaatcgcagcagcgagttcaacctttagaattacgaggaagcctg
cagtataaggaggattgcgttcagatgtatacaggtaccgtcggcagtagaatagggaga
tggatcgttaaaagctgttctgaaaacaatgcatttttcatttgcgaaaaacaaaaagat
tcttcaatatcatatgctaagagagacagtgtgtgtccacctgattatgaacaatttgga
aagagctgttatatgtttcatgctgtccccgaaaacgttgacagtgcacagaaaaactgt
caaagacacaataatggtagattagtatcagtcacgtctgtctatgagtatggctttgta
cgaggaatgacagctcaagtcaacttaaacagtcactggattgggcttagacgttctaat
gatacagttctgtacagatggactgatggaaatccttacttgtttagtcattggaacgac
tcggaaccatcacaacaacccaacgaagaatgtgtaatatccctcaatgggatgtggatg
gatgtcccttgcaccaatgaatatccttatctttgtgaagtcagttcagttaaagcagaa
atacgttctcctccgaaatgtatgccgttgttcggaatagcatatgacggcgcctgttac
tacgtacaaaatcaagggaaaaattcttggaaagatgctcatcaaaaatgtaaaagtcat
ggcatggatttggttagcatccactcagcaaaagagctagaaacacttcaaactacagta
gctagaatggcacagaccatcgtttggattgggttaaccaatgtccgaaaggcgtcagat
atgtttcaaagaggagtttattggtattggtcatcaggagaggaagtaagctacaccaac
tggggggagttcgagcccagtgaaaatatccttaacagtgacgaaggttgtgtttatatg
gacacaagcggtttctggcatgatgattcttgcagcaatgaatatgcttttatttgcaag
cattacggatccttctcagatctgaaaaccatcagggacaattctgggaagtctaatgat
tcaaatccccattttcaaaataatcaaatgtacagagagagtgttgaaagccatcgtcag
tcgcctgtgaatcaatcaaaagatcagaaaacaaataatacaagtgctgttgtgggcgtg
tcagtgggtgtgtctatccttattatattgatcatagcggtgattatatttgtgacgtat
aagaaaaagtatcggtggtatccaagaatgagtttgggattttcaaatgctatgtatcgt
cgagatatcgacgaatcttactaa
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integrated database retrieval system