Crassostrea gigas (Pacific oyster): 117692600
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Entry
117692600 CDS
T03920
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crg01002
]
117692600
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
117692600
Enzymes [BR:
crg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117692600
Peptidases and inhibitors [BR:
crg01002
]
Cysteine peptidases
Family C67
117692600
Ubiquitin system [BR:
crg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117692600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117692600
NCBI-ProteinID:
XP_034336906
LinkDB
All DBs
Position
LG6:6214120..6284531
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AA seq
963 aa
AA seq
DB search
MSDQNDNVYYILLADKIGKKKERGILRTTSKVDVLPGTLLLLVEERNDKQRNTLWWILET
LDPENIEIECQPTDTGQLSKTEFALLQPIPVCEERLSIFQDQEWLKEGAQLQINDQVTVA
VKGQPYLKGIIKYKGELPGVKGIQFGIELLGESKGKGTCDGVFRKKRFFTCDQNCGIFAA
IHKVRRDPDVPNRRQYSDRSIPIHNDSPLYQEEQKLIEESGLREKDRIVWISDNGPEFGE
VKWIGILPDSNRRDITVGVEFENPVGSGTGKYKNHRLFYAKAQHASLVPIMGLMKADVYM
EMNQGAGAFGAGYQPDYGIFQEPELINSPRSSQTRSAQQNVVQSYNPIQREILPNPVISP
ERGSYSSNSSSSSHQLMLSKDQIQVHLPPLSPKEKLPPPVTKEPAPPVRQMEEEKPAELG
GPNPLYEYTKAQDQQGEIKVESMEQPNSRRSNPNSRSMMPADPDLEVGSMVEVMSNPPLY
GVIRWMGYLPDQKEPVKPIAGLEMEEEISAGTDGSFGKHRLFSCPPKKAFFVPLYKCRKD
KRFVDNARRNSGVSNNFGSMETPDVLGNISPPVSLDVKQIEQEVCGKQKGIQGHHNSCYL
DATLLAMFYFTTVFDGILYRPKRMDDLREYDEVKQVIKEGIVNPLRKHNYVRADKVMKLR
HLLDKLGNIPGMMSEEKDPEEFLNLLLNQITKADPFLHIRSDNGGGTQHSFLYQLIMEKD
ERLVLPTTQQLFELSFLQMKVKLEERPPCLILQMPRFGKDYKMYRRIVPSLELDITDVLQ
NAPRECIICGDLAVFECKECYNQHGAGLNTIAFCEGCKDMSHKHKVRINHKWEAITVPQE
YKAIHNEQRTIQQQNPTIPREKMELFAVVCIQTSHYVSFVKCGKGKDAQWIFFDSMADRM
GEQSGYNIPEIKLCPDLSKWLSDDYQEEIMRRTDDKELPEHIRRLLCDAYMCMYQSPEVS
MVR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaccaaaatgacaacgtttactatattcttcttgccgataaaataggaaagaag
aaagaaaggggaatcttacggacgacatctaaagttgacgtgttacccggaactctcttg
ttactggtggaggaacgaaatgataaacagaggaacaccctctggtggatattagagact
ttagacccagaaaatattgaaatcgagtgtcaaccgacggatactggacaactcagcaag
acagagttcgcccttcttcaacctattcccgtttgtgaagaacgtctgtccatttttcaa
gatcaagaatggctgaaagagggggcacaactccaaattaatgaccaagtgacagtagcc
gtgaagggacaaccttatttgaaggggataattaagtacaaaggagaattacccggagtg
aaggggattcagttcgggattgaactcttgggggagagtaaagggaaggggacttgtgat
ggagtgttcagaaagaaacgtttcttcacatgtgaccaaaactgtggtatatttgctgcg
attcacaaggttcggagagaccccgatgttccgaatcgccgtcagtactctgaccgatcc
attcccatccacaatgattctcctttgtatcaagaggagcaaaagttgattgaagagtcc
gggctgagagagaaggacagaatcgtgtggataagtgacaatggtccggagtttggggag
gtcaaatggatagggattctgccggacagtaacagaagggacatcacagtgggggttgaa
tttgagaatccagttggatcaggtacaggaaagtataaaaatcacagactgttttatgct
aaagctcagcatgcatcattagttcctataatgggtttaatgaaggctgatgtatacatg
gaaatgaaccaaggggcaggagcctttggcgctggctaccagccagattacggaatcttc
caggaaccagagctaatcaactccccgaggtcttcccagacaagaagtgcacaacaaaat
gtagtgcaaagttacaatccaattcagagagaaattttacccaaccctgtaattagccca
gaaaggggaagttactctagtaattcctcctcctcatcccatcaactgatgctgtcaaag
gatcaaatccaagttcacctacctccactatctccaaaagagaagctccccccgcctgtt
acgaaggagccagcccctcctgtgagacagatggaagaggagaaaccagcggaactgggg
ggccccaaccccctgtatgagtacactaaagcacaagatcagcagggtgagataaaggtt
gaatccatggaacagcccaacagtcggcgaagtaaccctaactctcgttccatgatgcca
gctgaccccgaccttgaagtgggttctatggtggaggttatgtccaacccacccctttat
ggggtcatccgatggatgggctacctcccggaccagaaagaaccggtcaaacccattgca
ggcctggagatggaagaagaaatatcagctggaacagatggaagttttggaaagcatcgc
ctgttttcttgtccaccaaagaaggcattctttgtacctctttataaatgtcgaaaagac
aaacgttttgttgacaatgcgcgtcgcaatagtggagtttccaataactttggaagcatg
gagactccggatgtgttaggaaatatctctccacctgtttctctggatgttaaacaaata
gaacaagaagtgtgcggaaaacagaaaggcattcagggtcatcataactcttgttacttg
gacgctactttactagctatgttttattttaccacagtgtttgatggaattttatataga
cctaaacgtatggatgacttacgagaatatgatgaagtaaaacaagtaattaaagaaggc
attgtgaatccattaaggaaacataattatgtacgagctgataaagttatgaagttacgt
catcttctggataaattagggaacattcctgggatgatgagcgaagagaaagatccagaa
gaatttttaaatttacttttaaaccaaataaccaaagcggatccattcttacacatcaga
tcggacaatggtggaggtacccagcattcctttctgtatcagctgatcatggagaaggat
gaacgtctagtgcttcctaccacacaacagctgtttgagttgtcttttctccagatgaaa
gtgaaactagaagagcgcccaccatgtttgattcttcagatgccaagatttggaaaggat
tacaagatgtaccgccgtattgtccccagtctggagctcgatatcacagatgtactacag
aatgccccgcgcgagtgcattatttgtggagatctggccgtgtttgagtgcaaggaatgc
tacaaccagcacggggcgggactaaacaccatcgccttctgtgagggctgtaaggacatg
agtcataaacacaaggtccggattaaccacaagtgggaggccattactgttcctcaggaa
tacaaagccatccacaacgaacagagaacaatccagcaacagaatcccacgatacctcga
gagaaaatggagctgttcgctgttgtgtgtatacaaaccagtcactatgtatcgtttgtc
aagtgtggcaaaggcaaggatgctcagtggatcttctttgattcaatggctgatagaatg
ggtgaacaaagtggatataatataccagagataaaactctgtccagatttatcaaaatgg
ttgtccgatgattatcaggaagaaataatgcgtagaactgacgacaaggaacttccggag
catattcgtcgcctgctttgtgacgcctatatgtgcatgtatcagagtccagaggtatcc
atggtacgatga
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