Cylindrospermopsis raciborskii: L3I90_06250
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Entry
L3I90_06250 CDS
T08337
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
crk
Cylindrospermopsis raciborskii
Pathway
crk00521
Streptomycin biosynthesis
crk00523
Polyketide sugar unit biosynthesis
crk00541
O-Antigen nucleotide sugar biosynthesis
crk01100
Metabolic pathways
crk01110
Biosynthesis of secondary metabolites
crk01250
Biosynthesis of nucleotide sugars
Module
crk_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
L3I90_06250 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
L3I90_06250 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
L3I90_06250 (rfbC)
Enzymes [BR:
crk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
L3I90_06250 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UJS05825
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Position
complement(1384264..1384809)
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AA seq
181 aa
AA seq
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MKVSKTEIPDVLLIEPQVFGDERGFFYESFNEKLFTEKTGISPHFVQDNHSRSGKNVLRG
LHYQIQQPQGKLVRVAAGEVFDIVVDLRKSSPTFSQWVCVYLSSANKHQLWIPPGFAHGF
LVLSEYADFLYKTTDYYAPEYDRCILWNDPDLAISWPIGDEPIVSSKDKSGKLFSQAEVY
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaagcaagacagaaattccagacgtgctactaattgaaccacaggtttttggt
gatgagcggggttttttctatgagagttttaatgaaaagctctttacggaaaaaacggga
atatcacctcactttgttcaggataatcactctcgctctggcaaaaatgtgctccgaggg
ttacactatcagattcagcaaccgcaaggaaaattagttcgtgttgcagctggtgaagtt
tttgatattgttgttgatttaagaaagagttcccctaccttttctcaatgggtatgtgtg
tatttatcatcagctaataagcatcaactttggattccaccgggttttgcccatggtttt
ttagtcctatcagaatatgcagatttcttgtataaaactacggattattacgcaccagaa
tatgaccgatgtattttatggaacgatccagatttagctatttcttggccaattggggat
gaaccaattgtttcctccaaggataaatctggaaaattattttcccaagcggaggtttac
ccatga
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