Carnobacterium sp. 17-4: CAR_c06250
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Entry
CAR_c06250 CDS
T01452
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
crn
Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:
crn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crn03016
]
CAR_c06250 (rph)
Enzymes [BR:
crn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
CAR_c06250 (rph)
Transfer RNA biogenesis [BR:
crn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CAR_c06250 (rph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ham1p_like
RNase_PH
RNase_PH_C
LytR_C
Motif
Other DBs
NCBI-ProteinID:
AEB29319
UniProt:
F4BN14
LinkDB
All DBs
Position
637031..638395
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AA seq
454 aa
AA seq
DB search
MRADGRKNDENRLVTIETNYLKHPEGSVLVSFGDTKVICNATIETRVPRFLKGMGSGWVH
AEYSMLPRATNTRNIREAAKGKLSGRTMEIQRLIARSLRSSIDLEALGERSITVDCDVIQ
ADGGTRTASITGAFVALKLAIQTLLDSGELTESPIKENVAAISVGILKDGEAVLDLNYLE
DSSAEVDMNLVMTSLGQFVEIQGTGEESTFSSEQLSVMLEFGKKGINELIQVQDDAFQQA
LSLKNNGIKPYPLIPKDEILIATANAGKAREFEALFAKKGFKVKTLRDFPEIPEVEETGT
TFEENALLKAETIARTLNMLVLADDSGLKVDALDGAPGVFSARYAGEFKSDAANNAKLLH
ELTGVAKGDRTAQFHCTLALALPGKTSLVVEGEVEGLILTIPKGENGFGYDPLFFVESKG
KTMAELTQDEKNEVSHRAVALENLEQVWDDWINS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcagatggtagaaaaaatgatgaaaatagattggtgacaatagaaaccaattat
ttgaaacaccctgaaggatcagttttggtctcttttggagacacgaaagtaatatgcaat
gcaacaattgaaacaagagttccgcgtttcttaaaaggaatgggaagcggatgggttcat
gctgaatatagcatgttgccgagagctacaaatacacgaaatattcgtgaggcagctaaa
gggaaattaagcggacgtacaatggaaattcaacgattgattgcacgctcactacgctca
agtattgatttagaagccttaggagaacgttcaattacggtagactgtgatgtgattcaa
gcagatggtggaacacgtacagcaagtattacaggcgcgttcgtggctttgaaattggca
atccaaaccttattggatagtggcgaattaacagaaagcccaattaaagaaaatgtagca
gcaatcagtgtaggaatcttaaaagatggagaagcagtattagatttaaattacttggaa
gatagttctgcagaagtggatatgaatttagttatgacttctcttggacaatttgttgag
atccaaggaactggtgaagaatctactttctcttcagaacaactttcagtaatgttagaa
tttggtaaaaaaggaatcaacgaattaattcaagtacaagatgatgcttttcaacaagct
ctttctttaaaaaataacgggataaaaccgtacccactaattccaaaggatgaaatttta
atagctactgcaaatgctggaaaagctagagaattcgaagcgttattcgcaaaaaaaggg
tttaaagtaaaaacgttacgtgatttccctgaaattcctgaagttgaagaaacgggaaca
acatttgaagaaaatgcgttactaaaagcagaaacgatagctcgcacactaaatatgtta
gtattagcagatgattcaggattaaaagtggatgcactagatggtgcaccaggcgttttc
tctgctcgttatgcaggagaatttaaaagcgatgctgcgaacaacgccaaactattgcat
gaattaacaggtgtagctaaaggagaccgcacagcacaatttcactgtactcttgcactg
gctttacctgggaaaacaagcttagttgttgaaggcgaagtagaaggactgattttaacc
atacctaaaggtgagaatggttttggttatgatccattattcttcgttgaaagtaaaggg
aaaacaatggcagagttgactcaagatgaaaaaaatgaagtaagtcatcgtgcagtagca
ctagagaatttagaacaagtttgggatgattggataaatagttaa
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