Citrobacter rodentium: ROD_21741
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Entry
ROD_21741 CDS
T01145
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cro
Citrobacter rodentium
Pathway
cro00521
Streptomycin biosynthesis
cro00523
Polyketide sugar unit biosynthesis
cro00541
O-Antigen nucleotide sugar biosynthesis
cro01100
Metabolic pathways
cro01110
Biosynthesis of secondary metabolites
cro01250
Biosynthesis of nucleotide sugars
Module
cro_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
ROD_21741 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ROD_21741 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ROD_21741 (rfbC)
Enzymes [BR:
cro01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
ROD_21741 (rfbC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CBG88923
UniProt:
D2TQJ1
LinkDB
All DBs
Position
complement(2270248..2270796)
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AA seq
182 aa
AA seq
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MKVIKTEIPDVLIFEPKVFGDERGFFMESFNQKVFEEAIGRKVDFVQDNHSKSSKGVLRG
LHYQLAPYAQAKLVRCIAGEVFDVAVDIRESSPTFGKWVGVNLSAENKRQLWIPEGFAHG
FLVLSETAEFVYKTTNYYHPECDRGIRWDDAYIGIKWGNDYNVKLSDKDKKNPTMKDVFM
FM
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttattaaaacagaaatccctgatgtattaatttttgaaccgaaagtgtttggt
gatgaacgtgggttcttcatggaaagctttaatcagaaagtttttgaagaagccataggc
cgaaaggttgattttgtgcaggataaccattcaaaatcttctaaaggtgtgcttagaggt
ttacactaccaattagcaccttatgcgcaagccaaacttgttcgctgtattgcaggtgaa
gtttttgatgtggccgtagatattcgtgaatcttcgcctacctttgggaaatgggttggg
gttaatttgtctgctgagaataagcgtcagttgtggatccctgaggggtttgcacatgga
tttttggtgctgagtgaaacggcggaatttgtttataagacgacgaattattatcatcct
gaatgtgacagaggtattaggtgggatgatgcctatataggaattaaatgggggaatgac
tacaacgtaaaattgtcagataaagacaaaaaaaatccaacaatgaaagacgtttttatg
tttatgtaa
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