Caenorhabditis remanei (nematode): GCK72_005120
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Entry
GCK72_005120 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crq01002
]
GCK72_005120
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crq04121
]
GCK72_005120
Enzymes [BR:
crq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
GCK72_005120
Peptidases and inhibitors [BR:
crq01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
GCK72_005120
Ubiquitin system [BR:
crq04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
GCK72_005120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
USP47_C
Motif
Other DBs
NCBI-GeneID:
9822171
NCBI-ProteinID:
XP_053589233
LinkDB
All DBs
Position
II:complement(7510700..7515010)
Genome browser
AA seq
1340 aa
AA seq
DB search
MVRVSDSNTIHTNSEGESSTSYVRLAGNGLPGGEQQQESSSGVAPAPSGENSPGRSNQLA
LPSSSTAATTSSNSQYTIPLDENDHRYVGLVNQAMTCYLNSLVQSLYMTPEFRNAMYEWE
FVQHPAHAKEQKKKAEQSIPCQLQKLFLLLQTTDNDSLETKDLTQSFGWTSNEAYDQHDV
QELCRLMFDALEHKWKGTKHEKLIQDLYRGTMEDFVACLKCGRESVKTDYFLDLPLAVKP
FGAIHAYKSIEEALNAFIQPELLDGSNQYMCENCKSKQDAHKGLRITQFPYLLTIQLKRF
DFDYNTMHRIKLNDKMTFPDVLDLNEYIKEKRSAPTVAPPTTSPPSAWKTIPPKKTETEE
DDMELGSPNPKRCTPGNQSPNRYSYRGDENVVVGQPIDHEAVESIIKTSGDNVYELFSVM
VHSGNAAGGHYFAYIKNLDQDRWYVFNDTRVDFASTSEIEKSFGGHPSGWNQSNTNAYML
MYRKIDPKRNANFILSNKLPRHIRDSQEKWKRLEREAEEERLQKLSLIQVHVNINYPFPS
YVTLPDKRQLDLTPQKYQIADDFSEYKIEISREEPIRLVFGPAFDFFNERARAYSLPFSK
SSARLIYVENKQMVMEFRSPRDLDKKLRTVFNSYQGEPGSMYSVYFVLDVKIASGFFQID
YQNRMTIKVQRVDVGKKTTANELTIVVPGDEKMVKVKQWIGSQFRDDIYETLNARLVLEA
ASSSREFVLIDQTHNGMDFRHMINQYMGHATPTLYYDGGLNTMTNAESKEATVADRKLPF
EKSSMWQILDRKCFSTFVKVRLPSQEEVEKAASTRNAYQGLSWAETVAIMKEEDRLWNEP
RGAVEVMSTVSKNETSDAALVTEADDEPIPSGRGSTASMRSVSMEDFDGEAGISGSLCNN
TPQMSPCVSEGDDIDEKELDGKSQLMNDYMQKSNSNYYYNGDSQTHVNKNLKIALGEETP
SEAVSAVSSGQSTLVPSTSNQALSSMARSSDEAIDARITTVFSHENFHRLDVDSRMRVVD
FKKWVAAQLDMDKDQFVIVKHASDDGSDSGYEANFNDEETVSSAFQSCFISIKLRAPLKQ
DEKMIQIILFDMLENQRENWKQLFELPVSQSTVVGDILLQCIRLYKEIYGEELTPKMVRL
RDIGTTGHSNSKAVLNPNDTLEKRGYSWCSHIYMQIVTDESMIGKPGDPVLVRRFRPSTV
EVSPTHEVLVDSNAENPVLSCMEAISKVSGIPVDRIAIIDPKEFVWQKWPYTKSRLEMLD
TSSSKAVFTNDLHLNFPHPREFVEKVGGRVLYYKDSEEEPKVLSEEERKQIKIKENGQSA
NANRRKERPLRIQMSSVCEN
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggtacgggtctctgactcaaacacaatacataccaattccgaaggcgaatcgtcaacg
agttacgtgcgtttggctggcaatggtctcccaggcggcgagcagcaacaggagagctct
tcgggagtagctcctgcgccatccggagagaacagccctggaagatcgaatcagctggct
cttccctcttcatccacagctgcgacgacttcatctaacagtcaatataccattccattg
gatgaaaatgatcacagatacgtcggacttgtcaatcaggcaatgacgtgttatctcaac
agtctggttcagtctctctacatgaccccggagttccgtaacgcgatgtacgaatgggag
ttcgtgcagcatccagctcacgctaaagagcaaaagaagaaagctgaacagagcatcccc
tgccaactccaaaagctgttcctgcttctccaaacaacagataacgactcgctggaaacg
aaggatttgacacaaagtttcggatggacttccaatgaagcctacgatcagcatgacgtt
caagagctgtgtcgcctgatgttcgacgcgttagagcacaaatggaagggtacaaagcac
gagaagcttattcaagatctgtacagaggaacaatggaggattttgttgcatgtctgaag
tgtggacgagaaagtgtgaaaacggattattttctcgatctcccactcgcagtcaaacca
tttggagcgatacacgcatataaaagtatcgaggaagcattgaacgcattcattcagccg
gaacttcttgatggatctaaccaatacatgtgtgagaactgcaaaagtaagcaagatgca
cacaaaggactccggatcactcaatttccatatcttctaacgattcagctgaagcgtttc
gatttcgattacaatacaatgcatcgtataaagctgaacgacaagatgaccttcccagat
gtcctggacttgaatgaatatataaaggagaagcgttctgctcccaccgtggcacctcca
acaacatcaccaccgtctgcatggaagacaatcccgccaaagaagacagaaactgaagaa
gatgatatggagttaggatcaccgaatcctaaacgatgcactcccggaaatcagtcacct
aaccgttacagttatagaggagatgagaacgttgtcgtcggtcagccaattgaccatgaa
gcggtagaaagcattatcaagacgtcaggagacaacgtttacgagttgttctccgtaatg
gttcattctggaaatgctgccggtggtcactactttgcatatatcaaaaacttggatcag
gacaggtggtatgtcttcaacgatactcgtgtcgacttcgcatcgacatcggaaattgag
aagagtttcggcggacatccaagtggttggaatcaatcaaacacaaacgcatatatgctt
atgtatagaaagattgacccgaagagaaatgccaatttcatcctcagcaacaagcttccc
cgtcacatcagagactcacaggagaaatggaagaggctggaaagagaggctgaagaggag
cgtctacagaagttgagtctcattcaagttcacgtcaatatcaactatccattcccatca
tatgtgacgcttcctgacaaaagacaactcgatttgacaccacagaaatatcaaattgct
gatgatttcagtgaatataaaattgaaatatcgcgtgaagaaccaatccggttggtgttc
gggcctgctttcgatttcttcaatgaacgcgctcgtgcatatagcctgccgttctcaaaa
agtagtgctcgattgatttatgtggagaataagcagatggtgatggaatttcgtagcccc
cgagatctcgacaagaaattgagaactgttttcaatagttatcagggagaacctggatca
atgtacagtgtttatttcgttcttgacgtgaagattgccagcggtttcttccaaatagat
taccaaaataggatgactataaaagtgcagcgagtagatgttggcaagaagacgactgca
aacgagttgacgattgttgtacccggagatgaaaagatggtgaaagtcaagcaatggatt
ggatcacagttccgcgacgacatatatgaaacattaaacgcacgattagttctcgaagct
gcttcgtcaagtcgcgagtttgtattaatagatcaaactcataatggcatggacttccga
cacatgatcaaccagtacatgggccatgccactccaactctctactatgacggtggtctg
aacacaatgacaaatgcagaatccaaagaggcgacggttgccgatcgcaaacttccattc
gaaaaatcttccatgtggcaaattcttgataggaagtgcttctcgacatttgtcaaagtt
cgccttccatcccaagaagaagttgagaaagctgcatcaaccagaaacgcatatcaagga
ttgagttgggcggagactgttgctatcatgaaagaagaggacagattgtggaatgaaccg
cgaggtgctgttgaagtcatgtcgacagtttcgaaaaacgaaacatcggatgccgctctt
gtgaccgaagcggatgacgagccgattccatcgggaagaggttcaacagcatcgatgcgc
tctgttagtatggaggatttcgatggtgaagctggcatatctggaagtttatgcaataac
acaccacaaatgtccccatgtgtatcggaaggagatgacatcgacgagaaggaattggat
ggaaaatcacaattgatgaatgattatatgcaaaagtcaaattccaactattattataat
ggagattcacaaactcatgttaataagaacctgaagattgctctcggagaagaaactcca
tcagaggcggtgtctgctgtgagcagtggccagtcgacgctcgtcccttcaacatcgaat
caagctctctctagtatggctcgaagttccgatgaggctatcgatgcgagaatcaccact
gttttctcacatgaaaacttccacagacttgatgtagatagccggatgcgagtggttgat
ttcaagaaatgggttgccgctcagttagatatggataaagatcagtttgttattgtaaaa
catgcgtcagatgatggttcggatagtggatatgaggcaaacttcaatgatgaggagact
gtgtcaagtgcattccagtcatgtttcatatccataaaactgcgagctccgttgaaacaa
gacgagaagatgattcaaatcatcttgttcgatatgttggagaatcaaagagagaactgg
aagcaactcttcgaattgccagtctcacagagtacagtcgtcggtgacatacttctgcag
tgtattcgcctgtataaggaaatatatggggaagaactcacgcccaagatggtgcgatta
cgggatattggtacaacaggacacagcaactcgaaagcagtactcaatcctaatgacact
cttgaaaaacgtggatatagctggtgctcccatatatacatgcaaatcgtcaccgatgaa
tcaatgattggaaagcctggtgatccagttctagttcgacggttccgcccgtctactgtc
gaagtcagtccgacacatgaagttctagttgactcgaatgctgagaatccggtgctctcg
tgtatggaggcaatatccaaggtgtctggaattccagtggatcggattgcgattattgat
ccaaaagagttcgtgtggcaaaagtggccttacaccaagagtcgtctcgaaatgttagat
accagcagttcaaaggcggtatttaccaacgaccttcatctcaacttcccccacccgcgt
gagttcgtggagaaggttggaggtcgtgtgctctactacaaagattctgaagaagaaccg
aaagttctttccgaggaagagcgtaagcagatcaagatcaaagaaaacgggcagtcagca
aatgcgaatcgtcggaaggagcgtccgcttcgaattcagatgagcagtgtgtgcgaaaac
tga
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integrated database retrieval system
