Caenorhabditis remanei (nematode): GCK72_007210 Help Entry GCK72_007210      CDS       T09085                                  Name (RefSeq) hypothetical protein   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism crq  Caenorhabditis remanei (nematode) Pathway crq03013   Nucleocytoplasmic transport crq03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:crq00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     GCK72_007210    03015 mRNA surveillance pathway     GCK72_007210  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:crq03019]     GCK72_007210 Enzymes [BR:crq01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      GCK72_007210     5.6.2.5  RNA 5'-3' helicase      GCK72_007210 Messenger RNA biogenesis [BR:crq03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      GCK72_007210    mRNA cycle factors     Common to processing body (P body) and stress granule      GCK72_007210 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_12 AAA_11 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-RING_5 zf-C3HC4_2 AAA_19 UvrD_C_2 Viral_helicase1 TRAF3_RING AAA_30 zf-RING_4 PhoH FYVE_2 Motif Other DBs NCBI-GeneID:  9802110 NCBI-ProteinID:  XP_053590234 LinkDB All DBs Position II:15716028..15719675 Genome browser AA seq 1117 aa AA seqDB search MSSEEEEVVPVEPKTEREKNVFTPFYVDPIVPGICKSTEELSDLQKLLKADTHEAALRFA EASLEWKDNFFIHLPKLPRLSIDFITVCRVVPRIHAFYRVIVESPNGYIVTACHVNVHGH HRGDLRYLEVNDRTVTSKNEKTSIVGKLFLGDIIGVTGLARLTDFKEFDVFQSKTCDQCI WMATSIQVYPRTTLQDVTFSVLANGTAVVKEQSEVMNILNPESLPLTQGKLYTGTLFIPE KMFCHFTQEHMPKHKSRIANKCSKIHQPPNALGSIFDFEESPVLTEAFDIGVKAFSSNRN NVHAENTAEEVMETCVLMGYAAANSTSNGRFDCRAMPMYNIERRGFILKFSIDNPAEKPT EGKWMINSRINIDGPSGEVSAIIETVVINDPRKLWITARLSSSVPNKNKFDKGTHVVSQR ASPEYQILRTGFFYRTGPGENGRRILEALYGGRPIAHNYPRRARSHQFPSEVPIALNPYQ CDYVDMMMENIPIVVGCSPFGCGKSLTIVTTALALQKQDVDIYGPFASKKTQLMLTQSNY ACVNLVEIAKKIKPEIREGFKFVRYISEKNWKDLPDDCKTDFDLPKLMVPVFKQWAIGHR WSEDLEYPHKVNMVNFLLDGNHIDSFGFLDEACKIRNHKKFRREKAASGRCFQAFFMLYK PDLVMTTNDSLHALLKSAVLKTESIQTIQIDEASQVPEYSFISLLTSFPKAKFGLIGDTQ QLPPYCESNLNGKLKDYGIGNTMERAVKGEMFPHAMLREVYRCNPRVTNLLSDLFYEGRL IPGVIEDQRNEFIRKRPDFWPASQFPVMIVNNKEKGMRMGTSCQNGSEKELVKTLLDRLT EEHDGYQLQPSDIGVISFYSAQTSLLIDGLRGRGVKCGTVDAFQGSEREVIILCCTNAKI SQFMQMSNRINVAMSRAKQVTIIIGNMDGLRDARYWSDIVREVEREKCVIQAETLGVVQI PHSQRIPRNERNRGYHNNRTKVPKVSNQANISDEMNVLSLSAPTNPEPSTSESADTLIMK KELEAARKMAEQLEKELKKVQEKFQEKEWNLCEICVSPYEQGVAEKTPKFLVCGHTFCQE CLIHMTISNEIKCPTCRVASRGPAANLNTNFAIYKHL NT seq 3354 nt NT seq  +upstreamnt  +downstreamnt atgtctagcgaagaagaagaagtagttccagttgagccgaagacggagcgtgagaagaat gtgttcactccgttctacgtcgatccaatcgtaccaggaatttgtaagagcacggaagag ttgtcggatctccagaaactgctgaaagccgatactcatgaagctgctttgagattcgcc gaagcctctttggaatggaaagacaatttcttcatccaccttccgaaactacccagactt tcgattgacttcataactgtttgccgtgtcgtcccccgtattcacgctttctatcgtgtg attgttgagagtccaaatgggtacatcgtaactgcttgtcacgtcaacgtccatggacat catcgtggagacctccgttatctagaagtcaacgatcgcactgtcaccagcaagaatgag aagactagtatcgttgggaagttgttccttggtgatatcattggtgtcactggattggca agactgacggacttcaaggaatttgatgtgttccaatcgaagacgtgtgatcaatgtatt tggatggctactagcattcaagtttacccaagaaccacattacaagatgtgacattctca gtgctggcaaacggaactgctgttgtgaaggagcaaagtgaagtgatgaacatcttgaac cctgagtctcttcctctgacccaaggaaaactgtataccggcactttgtttattccagag aagatgttctgtcattttactcaggagcacatgccgaaacacaagagccgtatagccaac aagtgttcaaagattcatcaacctccaaatgctctcggttccattttcgactttgaagaa tctccagtgctcacggaagcatttgatattggagtgaaggcgttctccagcaatcgaaac aatgttcacgctgagaacactgccgaggaagtcatggaaacctgcgtactaatgggatat gctgctgccaattcaaccagcaatggaagatttgactgccgagcaatgcctatgtataat attgagagaaggggattcatattgaaattttcaatcgacaacccagctgagaagccaacg gaaggaaaatggatgatcaattctcgaatcaatattgatggaccatctggtgaagtgagt gcaattattgagacagtcgttataaatgatcctcgaaaactctggataactgcaagactt tcaagtagtgttccgaataaaaacaagtttgataaaggaactcacgttgtctctcaacga gcgagtccagaatatcaaatcttgagaactggattcttttaccgcacgggacccggagaa aatggacgacgaattctcgaagctctctatggaggtagaccaatagctcataactatcca agacgtgcaagatctcatcagttcccatccgaagttccaattgcactcaacccgtatcag tgtgattatgtggacatgatgatggagaacattccaattgtcgtgggatgttctccattt ggatgcggaaaatcattgactattgtcactactgctctggcactccaaaagcaagacgtt gacatttatggtccatttgcatccaagaaaacacagttgatgttgacccaaagtaattat gcatgtgtgaatttggttgaaatagcaaagaagattaaacctgaaatccgtgaaggtttc aagttcgttcgatatatttccgagaagaattggaaagatttaccagatgattgcaagaca gattttgatttgccaaagctcatggtacctgttttcaagcaatgggcaatcggacacagg tggtccgaagatttggagtaccctcataaagtgaatatggtgaactttctactggatgga aatcatatagattcttttgggtttcttgatgaggcatgtaaaatcagaaatcataaaaag ttcagaagagaaaaggcggcctctggtcgttgttttcaagcgtttttcatgctttacaag ccggatctcgtaatgacaacaaatgattcacttcatgctcttctcaaatctgcagttctt aaaaccgaatcgatacagactatccaaattgatgaggctagccaagttccggagtattcc ttcattagtctattgacttctttcccaaaagcgaaatttggattgattggagacactcaa caacttccaccgtactgtgaatcgaatctcaatgggaagctgaaggactacggtatcgga aatactatggagagagcagtgaaaggggaaatgttcccacatgcgatgcttcgagaggtc tacagatgtaatccaagagtcactaatcttctcagcgacctgttttatgaaggaagattg attcctggagtgattgaagaccaaagaaatgaattcataagaaagagaccagatttctgg ccggcttctcaattcccagtaatgattgtgaacaacaaagagaagggaatgagaatggga acttcttgtcaaaatggttcggagaaggaactcgtgaagaccctactggatcgtcttacc gaggagcatgatggatatcaactccagccatcggacattggtgtcatctccttctactct gctcaaacctcgttgctcatcgatggtctacgcggtagaggagtcaaatgtggtactgta gatgcattccagggaagtgagagagaagttatcattctttgctgcaccaatgcgaaaatc agtcagttcatgcaaatgagcaaccggatcaatgtcgccatgtcgagagctaaacaagtg acaattatcatcggaaatatggatgggctgagagatgcaaggtactggagtgacattgtc agagaagtcgaacgggagaaatgtgttattcaggcggaaactctcggcgtagttcaaatt ccacacagtcagagaattcccagaaatgaacggaatagaggatatcacaacaaccgtacc aaagtcccaaaagtcagcaaccaagcaaacatttctgatgaaatgaatgtcctaagctta tcggctcccaccaatcccgaaccttctacatccgaatctgccgacacattgatcatgaaa aaagaactggaagctgcaagaaaaatggctgaacaattggagaaggagttgaagaaagtg caagaaaagttccaagagaaggaatggaatctctgtgagatttgtgtcagtccatacgag caaggtgttgcagaaaagacaccaaagtttttggtctgtggtcacaccttctgccaggaa tgtctaattcatatgactatttcgaatgaaatcaaatgtccaacttgtcgtgttgcttcc cgtggtccagctgctaacctcaacacaaacttcgccatttataagcatctctaa

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