Caenorhabditis remanei (nematode): GCK72_009544
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Entry
GCK72_009544 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crq01002
]
GCK72_009544
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crq04121
]
GCK72_009544
Enzymes [BR:
crq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
GCK72_009544
Peptidases and inhibitors [BR:
crq01002
]
Cysteine peptidases
Family C67
GCK72_009544
Ubiquitin system [BR:
crq04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
GCK72_009544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
ABC_N
Motif
Other DBs
NCBI-GeneID:
9818504
NCBI-ProteinID:
XP_053587002
LinkDB
All DBs
Position
III:complement(6742162..6749946)
Genome browser
AA seq
1140 aa
AA seq
DB search
MPGDFESIPEQSAGSHQFRNPLEDFTGSHQYRTSIHALNNRDLDFLAQSSSNSNSISRQK
TRNHNGLHLDQNIPVGNLLDGFELIEVSCDSCEEKLVDISSSHSKPSLDQNRNGEQLIVA
LLQKKITGLKFHRSPGEYEEPRVIEIPAGTLVRGMADDDWKMPELNDWYSSSRPSRQEGM
ATPMEELDCNPTVCSMVTRTDVMRITQEQAIHLLSVKPHHRLDLYQNIERFGFLLDLKVG
DRVQVDVDDTMRKVPAKVSWIGERPQEPGIWYHVDFDTNTSQWPPNNSYPSHDRLNRHFD
TNWNLDMSGSSSVASSNSRLYYSPNQMHMPMKGGGVSALYDNRRLVQYNGSEEDYRSTPK
PAPRERIIPVTRQQQAEVERPTRQMRPPEPDYNYSNHHHHHPLPPPSVPSRISHSSMSAG
QPSRSKSVHTIQRNSFTKLYPADHNEPVESDQLGFRIGDQCIWNNSGTEERGVVKYIGFL
KGHKTLYAGVEFRNNIGAGTGVFNKEQLFQSREGHAGFVELCTLETPSSSSSTASSSSAQ
HRRRLSSSRSQQMPAASGTSISVPVNGRQNVNGKQASIESLSDPPPPPYAPPSPPRASSA
AAAHQQPPPLPPKPIAHVEDYLIESYDIGSHVVVAHLGAQRSGTVRWLGNEVDEQGERLV
RSAIVQLEDDVPTAWRRSTEAATYSGSPVIGGVLVPVQALRHNRAASSSSGQSLPISSNY
SMNQVSNTGHRRTEEFGSMDSGVEKQKCGPAKDMQQLVGRQKGIQGYCNSCYLDATLYAM
FVQTTFFDFLLEKSIKGSEKAAQFQKILAHEIVFPLRKVHYVRADHVMKLRKLLAELMPH
VTGLTNEEKDPEEILGFIFSEVFHAEPFIKLIGQNHVKDSQYLVPIVVDDWQGGAATSQH
LLERHMRSAQVTFAKPPPVLIMQLPRYGQQKVFDKILPLETIDITPFVAGAVPACTICGA
CSEVFCPTCFLTRRVFYSEIIFCRKCFHHSHLLPEIQDHQSRDLFPPAKPIKKPHSHKMV
LSAVLCIETSHYVAYVRSASNQWMFFDSMADREGLSDGFNVPVVRECGNMSDWLSLQGWN
RLKDADETGQIKAMFGKTVLDPLVGRLLSDSYICFYEDASQASSSSSSSTLINTFKNMMN
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgattttgaaagcataccggagcagtcagcgggctctcatcaatttcgcaat
ccactggaagacttcacgggatcacatcaatacaggacttctatacatgctttgaataat
cgtgatctggactttcttgcacaatcaagttcgaattcaaattcaatttcaaggcaaaag
acgagaaatcataacgggttacatcttgatcaaaacataccggtcggaaacttattagac
ggtttcgagctgatagaagtatcatgcgattcatgcgaggagaaattagtcgatattagt
agcagtcatagtaagccaagtttagaccaaaatcgtaatggagaacaacttattgtcgct
ttacttcaaaagaaaattactggtcttaaattccacagaagtccaggagaatatgaagaa
cctagagttattgagattccagctggaacgttagttcgaggaatggcagatgacgattgg
aaaatgcccgagttaaacgattggtattcaagtagcaggccaagccgtcaagaaggaatg
gctactccgatggaggaacttgactgtaatcctacagtctgctcaatggtcaccagaact
gatgtaatgcgaattactcaagagcaagctattcatctcctctcagtgaaacctcatcat
cgtctggatttgtaccaaaatattgaacggtttgggtttctcctggacctaaaagttggt
gatcgagtacaagttgatgttgacgacacaatgcgaaaagttccagcaaaagtctcatgg
attggagagagaccgcaagaaccgggaatctggtatcacgtggattttgatacaaatacc
tctcagtggcctcctaacaactcatatccatctcatgaccgattgaatcgtcactttgat
acaaattggaatttagacatgtctggatcgtcatcggtggcctcttcgaattcacgtctc
tattactcaccgaaccaaatgcacatgccaatgaaaggcggtggagtgtcagcactctac
gataatagaaggttagtgcaatacaacggaagtgaagaagactatcgaagtacaccgaag
ccagctccacgtgaaagaattattccggttacaaggcagcaacaagcagaagttgaacga
cctaccaggcaaatgagaccacctgaaccggattacaattattcaaatcatcatcaccac
catccactcccacctccatccgtcccatcccgtatatctcattccagtatgagtgctgga
cagccaagtcgaagtaaaagtgtacatacaatccagagaaattcgtttacgaaattgtac
cccgcagatcataatgaaccagttgaaagtgatcaactgggtttccgaatcggtgatcaa
tgtatttggaacaatagtggaactgaagagagaggagttgtcaagtatatcggatttctg
aaaggacacaaaacactttatgctggtgtggaatttagaaacaatattggtgcgggaact
ggtgtgttcaacaaagaacaactatttcagtcaagagaaggtcatgccggattcgttgag
ctttgcactctagaaacaccatcatcttcttcatcaactgcttcatcctcttctgcacaa
catcgacgtcggttgtcttcatctcgaagtcaacagatgccagcagcttctggaacttca
attagtgtaccagtgaacggaagacaaaatgtgaatggaaagcaagcgtctatcgaatct
ctgtcggatccaccaccaccaccgtatgctccaccatctccaccgagggcatcttctgca
gctgcagctcatcagcaaccaccacctcttccaccaaaaccgattgctcacgtcgaggac
tatctgattgaatcgtatgatattggtagtcatgtcgttgttgcacatcttggagctcag
agaagtggaacggttcgttggcttggaaatgaagtcgatgaacagggagaacgacttgtt
cgatcagcgattgttcaactggaagatgatgttccaactgcatggagaagaagcacagaa
gcagctacgtatagtgggagtcctgtgatcggaggtgttctcgtaccggttcaagctctc
aggcataatcgagcagcatcatcatccagtgggcaatctctaccaatttcttctaattat
tcaatgaatcaagtatccaacactgggcatcgacgaacagaagagtttggaagtatggat
tctggtgttgaaaaacaaaagtgtgggccagcaaaagatatgcaacagcttgttggaaga
caaaagggtattcaaggatactgtaattcgtgctatctggatgcaactctttacgccatg
ttcgtccaaaccactttctttgatttcctactcgaaaaatcgatcaagggatcggaaaag
gctgctcaattccagaagattttggctcatgaaatcgtgtttccacttcgaaaagtgcat
tacgtacgagccgatcatgtaatgaaactccgtaaattgcttgctgagctgatgccacat
gtaactggattaacgaatgaagagaaagatccggaagaaatccttggttttattttctca
gaggtcttccatgcggaaccatttataaaattgatcggccaaaaccacgtgaaagactct
caatatctggtaccaatcgtggtcgatgattggcaaggaggtgctgcaacctctcaacat
ttactggaaagacatatgagatctgctcaagtcacattcgcgaaaccaccacctgtgttg
attatgcaacttccgagatacgggcaacaaaaggttttcgataagattcttccactcgaa
accatcgatatcacaccgtttgttgctggagctgttcctgcgtgtacaatttgcggagca
tgttcggaagtgttttgtccaacatgcttcctcactcgaagagtattttattcggaaatt
atcttctgtcggaaatgtttccatcattctcatcttttgccagaaatccaagatcatcaa
agtcgcgacttgttcccaccagccaaaccaatcaagaaacctcactctcataaaatggtt
ctatctgcagtactttgcattgaaacatcgcattatgtggcttatgtacgttctgcttcg
aaccaatggatgttcttcgattcgatggctgatagagaaggactatcggatggattcaat
gtgccagttgtaagagagtgcggaaatatgtctgattggttatcactacaaggatggaat
cggttgaaggatgctgatgaaactggacaaataaaggcaatgttcgggaagacagtgtta
gatccacttgttggacgtcttctatcggacagctacatttgcttctacgaagacgcttct
caagcatcatcttcctcttcgtcttcaactcttattaacacattcaaaaatatgatgaac
tag
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