Caenorhabditis remanei (nematode): GCK72_016313
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Entry
GCK72_016313 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GCK72_016313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crq02000
]
GCK72_016313
04147 Exosome [BR:
crq04147
]
GCK72_016313
04090 CD molecules [BR:
crq04090
]
GCK72_016313
Enzymes [BR:
crq01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
GCK72_016313
Transporters [BR:
crq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
GCK72_016313
Exosome [BR:
crq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GCK72_016313
CD molecules [BR:
crq04090
]
Proteins
GCK72_016313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_16
Zeta_toxin
Rad17
AAA_29
AAA
AAA_5
AAA_28
AAA_15
AAA_30
AAA_25
SbcC_Walker_B
AAA_33
AAA_7
YobI-ATPase
nSTAND3
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
9816671
NCBI-ProteinID:
XP_053586214
LinkDB
All DBs
Position
IV:25527622..25534919
Genome browser
AA seq
1323 aa
AA seq
DB search
MLRNGSLRQSLRTLDSLSLAPEDVLKTAIKTVEDYEGDNIDENGEIKITRDAKDEVVKKV
SIPQLYRYTTMLEKIMLFVGTVVALITGAGLPLMSILQGQVSQAFINEQIVINTGNTTIP
PNGRNYTKTDFEHDVMNIVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKAIL
RQDISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMSFQYFSQFITGFIVAFTHSWKLTL
VMLAVTPLQALCGFLIAKSMSTFAIRETVRYAKAGKVVEETISSIRTVVSLNGLRHELER
YATAVEAAKKSGVMKGLFLGISFGAMQATNFFSFALAFYIGVGWVHDGSLAFGDMLTTFS
SVMMGSMALGLAGPQLAVLGTAQGAASSIYEVLDRKPVIDSSSPAGRKDMKIKGDITVEN
VHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKISIDGV
DVRDINLEFLRKNVAVVSQEPALFNCTIEENIRLGREDITREEMIAACKMANAEKFIKTL
PAQYGTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKA
AKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRTLMAQQGLYYDLVTAQTFTDAVD
ASAGGKFSRENSIARQTSEIHEALSRQASEMDDMMTRVRSSTMGSITNGPVIEEKEERLG
KDALTRLKQELEENNAQRTNLFEILYYAKPHALSLFIGMTAATIGGFIYPTYSVFFTSFI
NVFSGNPNDILSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTMDLRNKLFRNVLS
QHIGFFDSPQNASGKICTRLATDVPNLRTAIDFRFSTVITTIVSMIAGIGLAFYYGWQMA
LLIIAILPIVGFGQYLRGRRFTGNNVKSASEFADSGKIAIEAIENVRTVQALAKEDTFYT
NFCSKLDVPHKEAIKEAFIQGLSYGCACSVLYLLNTCAYRMGLALIIHQPNPIMTPMRVL
RVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLKQRSKIDSLSTVGEKKKLSGKVI
FKNVRFAYPERPTIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLSGEVFI
DGAEIKTLNPEATRSQIAIVSQEPTLFDCSIAENIVYGLDPATVTMSRVEEAAKLANIHN
FISELPEGYETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKIVQD
ALDRAREGRTCIVIAHRLNTIMNADCIAVVSNGTIIEKGTHTELMSQKGAYFKLTQKQMS
EKK
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaaacggcagtctccgacagagtctgcggactctcgactcactcagtttagca
ccggaagacgtgctaaagacggcgattaagacggtggaggactatgaaggggataatatc
gatgagaatggagaaatcaaaataactcgagatgctaaggatgaggtggtgaagaaggtc
tcgattcctcaattgtatcgctacacaacaatgttggaaaagattatgctgttcgtggga
acagtagtggcgcttatcactggagcaggattgccgttgatgtcgattctgcagggacag
gtgtcacaggcattcattaacgaacagattgtgattaacacggggaacacgacaatccct
cccaatggccgaaactacacgaaaaccgacttcgagcacgatgtgatgaatattgtttgg
agttacgctgcaatgacagtaggaatgtgggcagccggtcagattactgtaacttgttat
ctctacgtggcagaacagatgaataatcgattgagacgagagtttgtgaaagccattttg
cggcaggatatctcatggttcgatacgaatcactcgggaactttagcgactaaacttttt
gataacttggaacgtgtaaaagaaggaaccggagacaaaatcggcatgtcattccagtac
ttcagtcaattcatcaccggattcatcgtcgccttcactcacagctggaaactcactctg
gtcatgttagcagtcactccgttacaagctctctgcggtttcctcatcgccaagtcaatg
tcgacattcgcaattcgagagactgtaagatatgcgaaagctggaaaagtggtggaggaa
accatatcgagcatccgtacagtggtgtcattgaacggtctgagacacgagttggaaaga
tatgcgactgctgtcgaggctgcaaaaaagtctggagttatgaagggtctcttcttgggt
atttcatttggagctatgcaagctactaacttcttctcattcgctttggcattttatatc
ggtgtcggatgggttcatgacggatcgttggcttttggagatatgcttacgaccttctcc
tctgtcatgatgggatcgatggctctaggacttgccggcccacagcttgcagttctcgga
acagcacaaggagccgcttcaagtatttatgaagtcttggatagaaaaccagtgattgac
tcatctagccccgctggtcgtaaagatatgaaaatcaagggagacatcaccgtggagaac
gtccacttcacttatccatcccgtccggatgtcccgattctacgtggaatgaaccttcgt
gtcaacgctggacaaaccgtcgctctggtcggatcgtctggttgtggaaagtcgacgatt
atcagtttgttacttcgatattatgacgttttgaaaggaaagatatcgattgatggagtc
gacgttcgggatatcaatttggagtttttgagaaagaatgtggctgttgttagtcaggaa
ccggcattattcaattgtaccattgaggagaatattagacttggtcgagaagacatcacc
cgtgaggagatgatagctgcttgtaagatggccaacgctgagaagttcatcaaaaccctc
ccagcccagtacggtactctcgtcggagatcgtggaacccaactatctggaggtcagaag
caacgtatcgccatcgcgcgtgctctcgtaagaaatccaaaaattcttcttctcgatgaa
gccacgtcagctctggacgccgaatccgaaggaattgtgcagcaggctctcgacaaggca
gccaagggacgtaccactatcatcattgctcatcgtttgtcaactattcgcaatgctgac
ctcattatttcttgtaaaaatggacaagttgtggaagttggagatcacagaacactgatg
gctcaacaaggactgtattatgacttggtaacagctcaaacgttcacagacgccgttgat
gcttctgcaggaggaaaattctcccgcgagaacagcatcgcacgtcaaacctcggaaatc
cacgaagcactctcccgccaagcatctgaaatggacgatatgatgactcgtgtgagaagt
tccacaatgggatcaatcacaaatggaccagtgatcgaggagaaagaggagcgattggga
aaagacgcgttgactcggctgaagcaggagttggaggagaataatgcacagaggacgaat
ctatttgagattctatactatgcaaagccacatgctctctcacttttcattggaatgact
gcagcgacaatcggaggattcatctacccaacttactccgtattcttcacttcctttatc
aatgttttctccggaaacccgaacgatattctcagtcaaggacacttctgggctcttatg
ttcttggtactggccgctgctcagggtatctgctcgttcttgatgacattcttcatgggt
atcgcttctgaatcattgacgatggatttgagaaataagctgttccgaaatgtgttgtca
cagcatatcgggttcttcgactcgccacagaatgcgtctggaaagatttgtactagattg
gcaacggatgttccgaatttgagaacggccattgacttccgtttctccaccgtcatcacc
accatcgtctccatgatcgccggaatcggactcgccttctactacggttggcaaatggct
ctcctcatcatagccatccttccaatcgtcggcttcggccaatatcttcgtggacgtcgc
ttcaccggaaacaacgtgaaaagtgcctcagaattcgcggattccggaaagatcgctatc
gaggcgattgagaatgtgcggacagtgcaggcgttggctaaggaggatacgttctacacg
aacttctgctcgaaattggatgttccacataaggaagcgattaaggaggctttcattcag
ggactctcttatggatgcgcgtgctccgtactctaccttctcaacacgtgtgcataccgt
atgggtctcgcactcatcatccaccaacccaacccaatcatgaccccaatgcgtgtcctt
cgtgtcatgtatgccatcacaatttccacgtcgacactcggattcgccacctcttacttc
ccagagtacgcgaaggccacatttgctggtggcatcattttcggaatgttgaagcagaga
tcgaaaatcgatagtttgtcgacggtgggagagaagaagaagttgtcgggaaaagtgatc
ttcaagaatgttcgattcgcgtatccagaacggccaacaattgagatcctcaaaggactt
agtttctcggtggaacctggacaaactctcgcactagttggaccatcaggatgtggtaaa
tctacagtagtcgctctactcgagagattctatgacactttgtcgggagaggtgttcatc
gatggtgctgagataaagacgttgaatcctgaagcgacgagatcacaaattgcaatcgtc
tcgcaggaaccgacactgtttgactgctcgattgctgagaatattgtttatggattggat
cccgccaccgtaaccatgagccgagtcgaggaggcggctaaacttgccaacattcacaac
ttcatctccgaactgccagaaggctacgagacacgtgtcggtgaccgtggaacccaactg
tccggtggtcagaagcaacgtatcgccatcgctcgtgctctcgtcaggaatccgaagatt
ctgttgctcgatgaagcgacgtcagcactggatacagaatccgagaagattgtgcaagac
gcgttggatagggcgagagaggggaggacgtgtatagtgatcgcccatcggctgaataca
atcatgaatgccgattgcattgcggtcgttagcaatggaactataattgagaaaggaact
catacggagctgatgtctcaaaagggcgcctatttcaagttgacacaaaagcagatgagc
gaaaagaaataa
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integrated database retrieval system
