Caenorhabditis remanei (nematode): GCK72_021823
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Entry
GCK72_021823 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GCK72_021823
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crq02000
]
GCK72_021823
04147 Exosome [BR:
crq04147
]
GCK72_021823
04090 CD molecules [BR:
crq04090
]
GCK72_021823
Enzymes [BR:
crq01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
GCK72_021823
Transporters [BR:
crq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
GCK72_021823
Exosome [BR:
crq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GCK72_021823
CD molecules [BR:
crq04090
]
Proteins
GCK72_021823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Rad17
AAA_15
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_16
AAA_28
AAA_29
AAA_5
AAA_18
KAP_NTPase
DUF5906
G-alpha
tRNA_lig_kinase
DUF815
AAA_33
SbcC_Walker_B
PRK
RNA_helicase
nSTAND1
CPP1-like
Motif
Other DBs
NCBI-GeneID:
9827980
NCBI-ProteinID:
XP_053583428
LinkDB
All DBs
Position
V:complement(21403123..21408730)
Genome browser
AA seq
1289 aa
AA seq
DB search
MGLFKKKKDDSSSEGSTKKVEDPPPPKISIFQLFRYTSTLDRIMLIVGIIVSCATGLGLP
LMSIIMGNVSQNFVEIGTILLNSTDPAVVKKAKDDFSHDVIQNCLQYVYLGAGIFAAGFI
QASCFLVICENLSNRFRREFFYSVMRHEIAWYDKNTSGTLSNKLFDNLERVREGTGDKVG
LAFQMMAQFIGGFAVAFTYDWLLTLIMMSLSPFMMICGLFLAKLLATAATKEAKQYAVAG
GIAEEVLTSIRTVIAFNGQEYECKRYEDALAHGKKTGIKKSFLIGAGLASFFVIIYASYC
LAFWVGTNYVYSGRLQSGTVLTVFFSVMMGSMALGQAGQQFATIGTALGAAASLYEVIDR
VPEIDAYSERGVTPEKVSGRIKIQNLEFTYPTRPDVQILKDVSLEAQPGQTIALVGSSGC
GKSTIIQLLQRFYNPDAGKIYIDDIAIEDFNIKYLRQLVGVVSQEPNLFNTSIEQNIRYG
RADVDSEAINRALKEANAYDFIKTFPEGLNTLVGDRGVQMSGGQKQRIAIARALVRNPKI
LLLDEATSALDAESESVVQAALENASRGRTTIVIAHRLSTVRNADKIIVMKGGKIMEVGT
HDTLIEQKGLYHELVHAQVFADVEDKPMKKKEVERRMSRQTSERKGSVLKTQESQVEGPP
PAPEPAEKEIKRLKKELEEEGAVKANLFKILKYARPEWIYIFFAIIAALIQGAVMPAFSL
FFSQIINVFSNPDREQMKKDGHFWALMFLVLAAIQGTSMLFQCAFFGVAAEGLTMRVRSK
VYRNVLRQDATYFDMPKHSPGRITTRLATDAPNVKSAIDYRLGSVFNAIASIGGGLGIAF
YYGWQMALLVMAIFPFMAVGQALVIKYHGGTATSDAKEMENSGKTAMEAIENIRTVQALT
LQTKLYNIFCSHLDSPHNGNVSKAVIRGITYGFANSIQFFTYAAAFRFGLFLIFDNNVHM
SPENVLRVLFAISFSFGTIGFAASYFPEYIKATFAAGLIFNMLEEEPRIDGMTPNGTRPQ
LSGEVKLNKVFFRYPERPGVPILQGLNVHVKPGQTLALVGPSGCGKSTVISLLERLYDPL
DGAVTVDNNDLRQMNPKHLRKHIALVSQEPILFDTSIRENIVYGLQPGEYTEAEISIACQ
KANIHNFISELPDGYETRVGEKGTQLSGGQKQRIAIARALIRNPKILLLDEATSALDTES
EKQVQVALDAAAKDRTCIVVAHRLSTIVNAGCIMVVKNGQVVEQGTHNELMAKRGAYFAL
TQKQSSNQAGGQFDTGMAVEDDDDDNVKF
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgttcaagaagaagaaggatgactcgtcttcggagggctccacaaaaaaagtc
gaggacccaccaccgcctaagatctcaatcttccaactcttccgttacaccagcacactg
gatcgaatcatgttgatagtcggaatcattgtgtcatgtgcaaccggtctaggtctcccg
ctaatgtctattattatgggtaacgtctctcaaaacttcgtagaaatcggcacgatcctt
ctgaactccactgatcccgctgtcgtcaagaaggccaaagacgacttctcccacgatgtc
atccaaaattgtctgcaatacgtgtatcttggcgccggaatcttcgccgccggcttcatc
caagcttcctgtttcctggtgatctgtgagaatctgtcaaatagattccgtcgagaattc
ttctactcagtgatgcgccatgagatagcgtggtatgataagaatacatcaggaacgtta
tcgaacaaactttttgacaatctggaaagagtgcgtgaaggtactggagacaaagtcggt
ctggcgttccagatgatggctcagttcatcggaggattcgcggtagccttcacctacgac
tggcttctcactcttatcatgatgtctttatccccattcatgatgatttgcgggttgttc
cttgctaaactactggcaaccgctgctaccaaagaagctaagcagtacgccgtcgctgga
ggaatcgctgaggaagtgctgacctctatccggacagtgatagcgttcaatggtcaggag
tacgagtgcaagaggtatgaggatgccttggcgcatggtaagaagacaggaatcaagaag
tcgttcttgatcggcgccggtctcgcctcgttcttcgtcatcatctacgcctcctactgc
ttggcgttctgggtgggaaccaactatgtgtacagtggaaggcttcaaagtggaacagta
cttaccgtcttcttctctgttatgatgggatccatggcgttgggacaagccggacagcag
ttcgctaccattggaacggctcttggtgcagcggcttctctctacgaagttattgacaga
gttccggaaatcgatgcgtattctgagagaggagtgactccggagaaggtttctggaagg
attaagatccaaaacctggaattcacttatcccactcgtccggatgttcagattctgaag
gatgtatcgttggaagctcaaccagggcagacgatagcgttggtaggatcctctggatgt
ggaaagtctacaattattcaacttcttcaaagattctataacccagatgccggaaagatt
tatatcgatgatatcgctattgaggactttaatatcaagtatctcagacagctcgtagga
gtagtatcccaggaaccaaatcttttcaacacatccatcgagcagaatatcagatatgga
agggctgatgttgactcggaagcgatcaacagagcattgaaggaagctaatgcatacgac
tttatcaagacattcccagaaggtctgaacacgttggttggagatcgtggagtccagatg
tccggaggtcagaagcagcgtatcgctattgcgagagccctggtgagaaaccccaagatt
ctgttgttggatgaagctacaagtgccctggacgcagaatcggagagtgttgtgcaagca
gccttggagaatgcgtcgcgtggcaggactactatagtcatcgcccatcgattgtccaca
gttcggaatgctgacaagattattgtgatgaaaggtggaaagattatggaagtaggaaca
cacgacactttaatcgagcagaagggtctctaccatgaacttgtgcacgctcaagtcttt
gctgatgtcgaagacaagccgatgaaaaagaaggaggtggaacgaagaatgtctagacag
acatctgaaagaaaggggtcagtcctcaaaactcaggaatctcaagtggaaggccctcca
cctgcccctgaacccgctgagaaggaaatcaagcgcctgaaaaaagagctcgaggaggaa
ggagccgtgaaagccaaccttttcaaaattctcaagtacgcccgaccggaatggatctac
atcttcttcgccatcatcgccgctctcatccaaggagccgtcatgccagcgttctcccta
ttcttctcccagatcatcaatgtcttctcaaatcccgacagagagcaaatgaaaaaagat
ggacacttttgggcgctcatgttcttggttcttgcagcgattcaaggaacatcaatgtta
ttccagtgcgcctttttcggagtggccgccgagggactcaccatgagagtcagaagcaaa
gtctacagaaatgtgttgagacaagatgctacttacttcgatatgccaaaacactcccca
ggacgtatcacgactcgtctggctactgatgctccaaatgtgaaatctgcaatcgactac
cgtctgggctcagtcttcaacgccatcgcttcaatcggaggaggtctcggaatcgctttc
tactatggctggcaaatggctctactcgtcatggctattttcccattcatggctgtcggt
caggcacttgttatcaagtatcatggaggaaccgctacaagtgacgcgaaggagatggag
aactctggaaagactgcgatggaagctattgagaatatccggacggtgcaagctctgaca
ctccagaccaagctctataacattttctgctcccatctagactccccacataatggaaat
gtgtcaaaagcagtcatccgtggtataacctatggattcgcgaattctattcaattcttc
acctatgctgctgccttccggttcggactcttcctgatctttgacaataatgtccacatg
tccccggagaacgtgctacgtgtcttgttcgccatctcattttccttcggtaccattgga
ttcgccgcctcctacttcccagaatacatcaaagccactttcgcagcaggacttatcttc
aacatgttggaggaggagccacgaatcgatgggatgactccaaacggtacccgtccccag
ttgagtggagaagtcaaactgaacaaggtgttcttccgttatccagaacgtcccggagta
ccaattcttcaaggattaaatgtccacgtgaagcctggacagacgctggcgttggttgga
ccgagtggatgtggaaagagtactgtaatctcactactggaacgactctatgacccattg
gatggcgccgttacagtagacaataacgatttgagacagatgaacccgaagcatttgaga
aaacacatcgccttggtgtcccaggaaccaatcttgtttgacacctcgatccgggagaat
atcgtctatggactgcaacctggagagtacaccgaggccgagatctccatcgcttgtcag
aaagccaacatccacaacttcatctcagaactgccagatggctacgagacacgagtcgga
gagaagggaactcagctctccggaggtcagaagcaacgtatcgccatcgcccgtgctctc
atcagaaatcccaagattctgttgttggatgaggcgacgagtgcgttggatacagaatcc
gagaagcaggtgcaggtggcgttggatgctgcggcgaaggataggacgtgtattgtggtg
gcgcatcggctgtcgactattgtgaatgccgggtgtattatggtggtgaagaatggacag
gttgtggagcaaggaacccacaacgaactaatggcaaaacgtggcgcctactttgccctg
acccaaaagcagtcttccaatcaagccggtggtcaattcgataccggaatggctgtggag
gacgatgatgatgacaatgtcaagttctaa
DBGET
integrated database retrieval system
