Caenorhabditis remanei (nematode): GCK72_023979
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Entry
GCK72_023979 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq00511
Other glycan degradation
crq00513
Various types of N-glycan biosynthesis
crq00520
Amino sugar and nucleotide sugar metabolism
crq00531
Glycosaminoglycan degradation
crq00600
Sphingolipid metabolism
crq00603
Glycosphingolipid biosynthesis - globo and isoglobo series
crq00604
Glycosphingolipid biosynthesis - ganglio series
crq01100
Metabolic pathways
crq04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
GCK72_023979
09103 Lipid metabolism
00600 Sphingolipid metabolism
GCK72_023979
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
GCK72_023979
00531 Glycosaminoglycan degradation
GCK72_023979
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
GCK72_023979
00604 Glycosphingolipid biosynthesis - ganglio series
GCK72_023979
00511 Other glycan degradation
GCK72_023979
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
GCK72_023979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
crq03110
]
GCK72_023979
Enzymes [BR:
crq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
GCK72_023979
Chaperones and folding catalysts [BR:
crq03110
]
Intramolecular chaperones
Others
GCK72_023979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Vel1p
Motif
Other DBs
NCBI-GeneID:
9824382
NCBI-ProteinID:
XP_053579229
LinkDB
All DBs
Position
X:complement(10097458..10099692)
Genome browser
AA seq
552 aa
AA seq
DB search
MRLLILSLLFVSTFAWFYGRDEPDRWSVGGVWPLPQKIIYGSKNRTLTYDKIGIDLGDRK
DCDVLLSMADNYMNKWLFPYPVEMKTGGTEDFIITVTVKEECPSGPPVHGSSEEYLLRVS
LSEAVINAQTVWGALRAMESLSHLVFYDQKSQEYKIRTVEIFDKPRFPVRGIMIDTSRHF
LSLNVIKRQLEIMSMNKMNVLHWHLVDSESFPYTSDKFPELHGVGAYSPRHVYSREDIAE
VIAFARLRGIRVIPEFDLPGHTSSWKGRKGFLTECFDEKGEETFLPNLVDPINEANFDFI
SEFLEEVTETFPDQFLHLGGDEVNDFIVECWVRNKKIRKFMEEKGFGNDTILLENYFFEK
LFAIVEKLKLKRKPIFWQEVFDNNIPDPNSIIHIWKGNTHEEIYEQVKNITSKNFPVIIS
ACWYLNYIKYGADWRDEISGTAPSNSRYYYCDPTNFNGTDAQKNLVLGGIAAIWGELVDN
TNIEARLWPRASAAAERLWSPAEKTQRAEDAWPRMHELRCRLVSRGYRIQPNNNPDFCPF
EFDEPPATKSEL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttttgattttatcacttttatttgtctccacatttgcgtggttctacggccga
gatgagccggatcgttggagtgtcggaggggtttggccacttccccaaaaaatcatctat
gggtctaagaaccgaactctcacttatgacaaaatcggaattgatcttggagacagaaaa
gattgtgatgttctcctgtcaatggctgataattacatgaataagtggttgttcccatac
ccggttgaaatgaaaacaggaggcactgaagatttcattataaccgtgacagtgaaagaa
gagtgtccgagtggaccaccagttcatggatccagtgaagaatatcttttacgtgtcagt
ctctcagaggcagtaattaatgcgcaaaccgtttggggtgcacttcgcgcaatggagtca
ttgagtcatttagttttctatgatcagaaatctcaggagtacaaaatccgtactgttgaa
atattcgacaagccccgtttcccagttcgtggaattatgatcgacacaagtcgtcatttc
ttgtctttgaatgttatcaaacgacaattggagattatgtcaatgaataagatgaatgtt
cttcattggcatcttgttgacagtgaatcgttcccctatacttctgacaaattcccagag
ttacatggagtgggggcgtattctccgcgtcacgtatactcacgtgaagatattgctgaa
gttattgcgtttgcaagactccgtggtattcgtgttattccggaattcgatttacccgga
cacacatcttcttggaaagggagaaaaggttttttgacggagtgttttgacgaaaagggt
gaagagactttcttgccaaatctggttgatccaataaatgaagctaattttgactttatt
tccgaattcttggaagaagtcactgaaacattccctgatcaatttttacatcttggtggt
gatgaagtgaatgattttatcgttgagtgttgggtcagaaataagaaaatccgaaaattc
atggaagaaaaaggattcggaaacgacacaattcttttggaaaattacttttttgaaaag
ctctttgcaattgttgaaaaactaaaattgaaacgtaagccaatcttctggcaagaagtg
tttgataacaatatccctgatccaaattcaatcattcatatttggaagggaaacactcat
gaggaaatctacgagcaggtcaagaacatcacatccaagaacttcccggttatcatttcc
gcgtgttggtatttgaactacatcaaatatggagctgactggagagatgagatcagtgga
accgctccatctaattcgagatattactattgtgaccctacaaacttcaatggtactgat
gcacagaaaaacttggttttgggtggtattgcagcaatctggggagagttggtggataat
accaacattgaagccagactttggccaagagcgtccgcagcggccgaaagactttggtca
ccagcggagaagactcagcgagctgaggatgcgtggccaagaatgcacgaactccgttgt
cgattggtctccaggggataccgtatccagcctaacaacaatcccgacttctgtccattc
gagtttgatgagcctccagcgaccaagtcggagctttaa
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