Caenorhabditis remanei (nematode): GCK72_024955
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Entry
GCK72_024955 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GCK72_024955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crq02000
]
GCK72_024955
04147 Exosome [BR:
crq04147
]
GCK72_024955
04090 CD molecules [BR:
crq04090
]
GCK72_024955
Enzymes [BR:
crq01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
GCK72_024955
Transporters [BR:
crq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
GCK72_024955
Exosome [BR:
crq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GCK72_024955
CD molecules [BR:
crq04090
]
Proteins
GCK72_024955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
AAA_29
Zeta_toxin
AAA_30
SbcC_Walker_B
DUF815
SRP54
DUF87
APS_kinase
AAA_24
AAA_21
Motif
Other DBs
NCBI-GeneID:
9806631
NCBI-ProteinID:
XP_053579701
LinkDB
All DBs
Position
X:14890378..14894868
Genome browser
AA seq
1330 aa
AA seq
DB search
MFPVADPPRAGSEDTGQDSRRSTIRAVPALVVSNPKTTAAPIDFSDDDEIRKEYQPSCFD
KFVDYILCRGDVAKRTYETRPVSIFGLFKYAKAFDHFLLFIGVICAIISGVSQPVLTILA
GRVTNALLIYAPHTKQFRNKATENVYIFLGIGIFVTITNYIQYMCFQHCCSRIMAQMRHR
YVYSVLRQNAGWFDKNHSGTIATKLNDSMERIREGIGDKLGVLLRGVAMLIASIVVAYIY
EWRLACMMLGVAPTCVGCMSLMARQMTATTVKELSGVEKAGSIAEESLMGVRTVQAFNGQ
EEMVERYRVELNKGRKYAIWKGFWSGLYGGLFFFWLFAFQGCGFLYGAYLLKVGIISSPG
DVFIIVMAMLLGSYFLGLISPHLMVLLNARVAAASIYETIDRVPKIDPYSKKGKFLDRII
GRVKFENVHFRYPTRKEAKILNGLNLTIEPGTSVALVGHSGCGKSTSVGLLTRLYEPEAG
NVMIDGIDVRELNIDYLRNVIGIVQQEPILFNDTIHNNLLLGNPSATREKMIEVCKMANA
HDFIEKMPKGYDTLIGDGGVQLSGGQKQRVAIARTLIRDPKILLLDEATSALDAQSESVV
QSALNNASKGRTTIMIAHRLSTIREADKIVFFEKGVIVESGNHEELVRLGGRYYDLVKAQ
AFKPDSDPSPSNDEIDEEIDLGPSPSGLHSRQSSFTSSIRSKMSGAEAFRRGTLGADSFG
GGRSSARADAENAAFAEEEARVMAQDGKIRAGYMDIFKNAHGNYTVMFLGFVTGLIRGLE
LTAFALLFGWVFEGFQFLNVDNGKMMHRMAMAVIAYGCSGFGCFVSQFLSSVFFALVSEN
LALRFRVMSFRNLLYQDASFFDNPAHAPGKLITRLATDAPNCKTVVDSRMLQVLYAASAI
IANIVIAFIYCWHLAILGTALIILLGVTMCGLAYKISLLNIKQIQCDEAGRIAIEIIENV
KTIQLLTRCEHFYDHYEKSSKSQKRSELKKGLIEAINYTITQSFMYYMMCFCFALGIRLI
YQGNKPSQDVFQANIAMLLTAMGVMNSAQYFPEFVKAKTAAGLLFNVIYRKPRTGDLLEG
SRPEVRGNILFEDVKFSYPQRPHQPIMKGLQWTALRGQTVALVGPSGSGKSTCIGMLERF
YDVTGGVLRIDGQDIRGFSLFHLRTQMALVGQEPRLFAGTIKENICLGLENVPMEKINHA
LELANANRFLANLPAGIETDVGEKGSKLSGGQKQRIAIARALVRNPKILLLDEATSALDS
ESERAVQEALDRAREGRTCITIAHRLSSIQNSDVIVYIENGRVQEAGNHKQLMSKKGKYY
ELIQKQDLGI
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgttcccagttgctgatcctccccgtgcgggatccgaagacactggacaagattctagg
cggagtactattcgagctgtacctgcacttgttgtatctaacccgaaaacaacggcagcg
ccgatagatttttcagatgacgatgaaataagaaaagaatatcagccgtcatgttttgat
aagtttgttgactatattctctgccgaggcgatgttgcaaagcgaacctacgaaactcga
ccagtttccattttcggtctgttcaaatatgcaaaagcatttgatcattttcttctgttc
atcggtgttatctgcgcaatcatatctggagtttctcagccagttctcacaattcttgct
ggtcgcgtcaccaatgctctacttatttacgctccgcatacaaaacagtttcggaacaag
gcgaccgagaatgtttacattttccttggcattggtatttttgtgacaatcacaaactac
attcagtatatgtgcttccaacattgttgctcaaggattatggcgcagatgaggcaccga
tatgtgtactcagtgctccgacaaaatgcaggatggtttgataagaaccactctggaacg
atagcgacaaaactgaacgacagtatggaaagaattcgtgaaggtatcggtgacaagctt
ggagtcctccttcgtggagttgctatgctaattgcatcaattgttgttgcatacatttat
gaatggagacttgcttgtatgatgttaggagtagctccgacatgtgtggggtgtatgtcc
ctgatggctagacaaatgacagcaacaactgtgaaggagttgagtggcgttgagaaagca
ggatctatcgctgaagaatctttgatgggtgtccgaactgttcaagcattcaatgggcaa
gaagaaatggttgagagataccgagtcgagttgaacaaaggaaggaaatatgcgatttgg
aaaggattctggagtggactctatggaggactattcttcttctggctcttcgctttccag
ggatgtggtttcctttatggagcttatctgctcaaagttggaattattagttcaccagga
gatgttttcatcattgtcatggcgatgctcctgggctcatattttctgggtctgatctcc
ccacatcttatggttctactaaatgcaagagtagctgctgcatccatatatgagactatt
gacagagtgcccaagattgatccctactccaagaaaggaaaatttttggacagaataatt
ggtagagtaaagtttgaaaatgttcatttccggtatccaaccagaaaggaggcaaagatt
ctaaacggtctcaaccttaccatcgaaccaggaacatccgttgctctagtcggacactct
ggttgcggaaagtcaacatccgtcggattgctgacgaggctctatgaaccggaagctggc
aatgtgatgatcgacggtattgacgttcgagagttgaacattgactatcttagaaatgtg
attggaatcgttcaacaagaaccaattcttttcaatgacaccattcataataacctactc
cttggaaatccaagtgcaactagagaaaagatgattgaagtatgcaaaatggctaatgcc
cacgactttattgagaaaatgccaaaaggttacgatacactgattggagatggtggagtt
caactatccggagggcagaaacaacgtgttgccattgccagaacactgatccgtgatcca
aaaatccttcttcttgacgaagctacatctgctcttgatgctcagagtgaaagtgtggta
caatctgctctaaacaacgcgtctaagggaagaactactatcatgattgctcacaggctc
tcaactattcgggaagctgacaagattgtcttctttgagaaaggagttattgtggagtcc
gggaatcatgaggagctggtacgtctgggaggaagatactatgacctggtgaaggctcaa
gcgttcaaacctgatagcgatccgagtccgtctaacgatgagattgatgaggaaattgac
ttgggaccatctccaagtggactccactctcgtcagtcatcattcaccagttctatcaga
agcaaaatgtctggagcggaagctttcaggagaggaacactcggagctgattcatttggt
ggtggaagatcttcagcgagagctgacgcggagaatgcagcgtttgctgaggaagaagct
cgagtcatggctcaagatggaaaaatcagagctgggtacatggatattttcaagaatgct
catggaaactatacggttatgtttctgggatttgtgaccggattgatacgtggattggaa
ttgaccgcttttgcgttgttgtttggatgggttttcgaaggatttcagtttttgaacgta
gacaatgggaaaatgatgcatcgaatggcaatggcagttattgcatatggatgcagtggg
ttcggatgttttgtttctcagttcttgagttcagtattcttcgctcttgtctcggaaaac
ttagcactccgtttccgagttatgtcgtttcgaaacctactctaccaggatgcttcattt
tttgacaacccagcgcacgcaccaggaaaactcatcactcgtcttgccacagatgctccc
aactgtaaaactgttgtggactctcgaatgcttcaagttttatatgctgcctctgcaatt
attgccaatattgtgattgcttttatctactgctggcatcttgctatcctcggaaccgcg
ttgatcattttgcttggggtaacaatgtgtggattagcgtacaagatttctcttcttaat
atcaagcaaatccaatgcgatgaagctggaagaatcgccatagaaattattgagaatgtg
aagactatccaacttctcactagatgtgaacacttctacgatcattatgagaaatcttcc
aaatcacaaaaacggagtgaactgaagaaaggattgattgaagctatcaactacaccatc
actcaatcattcatgtactacatgatgtgtttctgttttgctcttggtatcagactaatc
taccagggcaacaagccttctcaagatgtttttcaagccaacatagcaatgttattgacc
gcaatgggtgtcatgaactctgctcagtactttcctgaatttgtgaaagcaaaaacagca
gcaggtcttctcttcaatgtcatctatcgaaaaccacgtactggagatttattagaagga
agtcgaccagaagttcgaggaaatattctatttgaagacgttaagttctcttaccctcaa
cgacctcatcagccaatcatgaaaggattgcaatggactgctctacgtggacaaactgtt
gctctcgttggaccatctggctcaggaaagagtacatgtattggaatgctcgaaagattc
tatgacgtcactggtggagtacttcggatcgatggacaagacatcagaggtttctcattg
ttccatctcagaacacagatggcgcttgtcggtcaggagcccagactgtttgctggcacc
atcaaagaaaacatttgcttgggattagaaaacgtgccaatggaaaagatcaatcacgcg
ttggaacttgcgaatgcaaatcggtttttggctaaccttccggctggaattgagacagat
gttggagaaaaaggatcaaagttatctggaggtcaaaaacagagaattgcgattgcaaga
gcattggttagaaatccaaagatattacttctagatgaagcaacgtctgcattggattca
gaatcagagagggcagtacaagaagcattggatcgtgctcgagaaggcaggacgtgcatc
acaattgctcatcggttatcttctattcaaaactctgacgtcattgtatatattgaaaat
ggacgggtgcaggaagcaggaaatcataaacagttgatgagcaagaaaggaaaatactat
gaactgattcaaaaacaagatttggggatttga
DBGET
integrated database retrieval system
