Caenorhabditis remanei (nematode): GCK72_024956
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Entry
GCK72_024956 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GCK72_024956
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crq02000
]
GCK72_024956
04147 Exosome [BR:
crq04147
]
GCK72_024956
04090 CD molecules [BR:
crq04090
]
GCK72_024956
Enzymes [BR:
crq01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
GCK72_024956
Transporters [BR:
crq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
GCK72_024956
Exosome [BR:
crq04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GCK72_024956
CD molecules [BR:
crq04090
]
Proteins
GCK72_024956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_29
AAA_16
SbcC_Walker_B
SRP54
AAA_24
DUF815
Motif
Other DBs
NCBI-GeneID:
9826115
NCBI-ProteinID:
XP_003099775
UniProt:
E3MVN4
LinkDB
All DBs
Position
X:14896452..14901032
Genome browser
AA seq
1327 aa
AA seq
DB search
MAPKDDPDNRGFDDQRRPSQRSTVLAIPALAVNDPKVDPKIASDLPSNYIDDDEDGPQLY
TPSLFEKVLNYALCRGDIANQQLEAQPVSIPGLFRYGKKFDWLLLFIGTICAIISGVSQP
ILALVSGRVTNALLVYPPTSKQFRNKANENVYIFLGIGIFISITNFIQYMCFQHCCTRVM
AQMRHRFVYSVLRQNAGWFDKNHSGTITTKLNDSMERIREGIGDKLGVLLRGFAMLIAAI
VVAYIYEWRLASMMLGVAPTCCICMSLLARQMTSTTIKELIGVGKAGSIAEESLMGVRTV
QAFNGQEEMVGRYEAELEKGRKFAVWKGFWSGFFGGLFFLCLFSFLGCGMLYGAYLLRVG
IITTPGDVFIVVMSMLLGAYFLGLISPHMMVLLNARVSAATIYQTIDRVPKIDPYSKAGK
RLPNVIGRVKFENVHFRYPSRKEAKILNGLNLTVEPGTSVALVGHSGCGKSTSVGLLTRL
YEPEAGNVTIDGTDVRELNIDWLRNIVGIVQQEPILFNDTIHNNLLIGSPGATREKMIEV
CKMANAHDFIEKMPKGYDTLIGDGGVQLSGGQKQRVAIARTLIRDPKILLLDEATSALDA
QSESVVQSALNNAAKGRTTIMIAHRLSTIREADKIVFFEKGVIVEAGNHEELVHLGGRYF
DLVKAQQFKADPEATEDFEEEEISLDDTSRSSRRSSMTSARSGSDAFQRGNSLNDSFSGS
KRSARADAENDAFAAHEAEIMAHDGEITAGYLDIFRNAKGNYLYMFFGTVFALIRGLELP
ALALIFGWVFEGFTFVPYGGRMMHRMAMAVIAFASVGVGVWISQVISSVLFAVVSENLSM
RFRVQSFRNLLYQDASYFDNPAHAPGKLITRLASDAPNIKAVVDARMLQVIYALAAIIGN
IVIAFIYCWQIGILGTSLIILLAFVMIGLAYKISLMNIEQIKNDEAGRIAIEIIENVKTI
QLLTRSELFFDHYQTASKQQKRSELKKGMIEAVNYSLSQSFMYFMMCFTYAVGIRIIYQG
DKSPDDTFKGIISMMLGAVAVMNSAQYFPEFVKAKTAAGMLFNIIYRKPRTGDLMEGDRP
EIRGNILFENVKFSYPQRPLQPIMKGLQWTALRGQTVALVGPSGSGKSTNIGMLERFYDV
TDGVLRIDGQDIRNLSLYHLRTQMALVGQEPRLFAGTIRENVCLGLKDVPLEKINQALEL
ANANRFLANLPAGIDTDVGEKGGQLSGGQKQRIAIARALVRDPKILLLDEATSALDSESE
RAVQEALDRAREGRTCITIAHRLSSIQNSDLIVYIDKGKVQEAGNHSQLMQKKGRYYKLI
KKQDLAV
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggccccaaaagacgaccctgataatcgaggtttcgacgatcagcgtcgaccctcacag
aggagtacggtgctagcgatacctgcactagctgtgaacgatccaaaagtcgatccgaaa
attgcaagtgatttaccctcaaattatatagacgatgatgaagatggaccacaattatac
actccatcgcttttcgaaaaagtactcaattatgctctatgcagaggagatattgctaat
caacaacttgaagctcaaccagtgtccattcccggattgttccgatatggtaaaaagttt
gattggttgctcttgttcattggtaccatctgtgcaatcatctctggagtctcccaaccg
attctggctcttgtcagtggtcgagtcaccaatgcactccttgtctatccaccaaccagc
aagcagttccgaaacaaagcaaatgaaaatgtatacattttccttggaattggtatcttc
atctctatcaccaatttcatccaatacatgtgcttccaacactgctgtactagagtcatg
gctcaaatgagacatagattcgtgtactccgttcttagacagaatgctggatggttcgat
aagaatcactcaggaacaattacgaccaagctgaacgacagtatggaaagaatccgtgaa
ggtatcggagataagctcggagtcctcctgagaggattcgctatgcttatcgctgctatc
gttgtcgcttacatctatgagtggagacttgcatctatgatgttaggtgttgccccaact
tgctgtatttgtatgtctcttttagccagacaaatgacctccacaacaattaaagagttg
attggtgttggaaaggctggttccatcgcagaagaatcattgatgggtgtcaggactgtt
caagcgttcaatggacaagaagaaatggtcggaagatacgaggcagaacttgagaaagga
aggaaattcgcagtgtggaaaggattctggagtggattttttggaggcctcttcttcctg
tgtctcttctctttcttgggatgtggtatgctctacggagcttacctcctccgagttggt
atcatcacaacaccaggagatgtgttcattgttgtaatgtctatgttgctcggtgcctat
ttccttggtctcatctctccacatatgatggtattgttgaacgcaagagtgtcagctgcc
accatctatcaaacaatcgaccgtgttccgaagatcgatccatactccaaggcaggaaaa
cgactaccaaatgttattggtagagtcaagtttgagaacgttcacttccgttatccaagt
agaaaggaagccaagattcttaacggactcaatttgactgtcgaaccaggaacatctgtt
gcgttggttggtcattcgggatgtggaaaatcgacttcagttggattgttgactagactg
tacgagccagaagctggaaatgtcactatcgatggaactgacgtccgggagcttaacatc
gactggttgagaaatattgtaggaattgtgcaacaagaaccaattctcttcaatgacacc
attcataacaacttgttaattggaagtccaggagctactcgtgagaagatgattgaagta
tgcaaaatggctaatgcccacgactttattgagaaaatgccaaaaggttacgatacactg
attggagatggtggagttcaactatccggagggcagaaacaacgtgttgccattgccaga
acactcatccgtgatccaaaaatccttcttctcgacgaagcaacttcggctttagatgct
cagagtgaaagtgttgtacagtctgcactcaacaacgccgccaagggaagaactaccatc
atgattgctcacagactctcgactatccgtgaggctgacaagattgttttctttgagaaa
ggagttattgtggaagctggtaaccacgaggaactagtgcatcttggtggaagatacttc
gatttggtaaaggctcaacaattcaaagcggatccagaagctactgaagattttgaggaa
gaagaaattagcttagatgacaccagtagaagttctcgacgatcttccatgactagtgca
agatctggttcagatgcattccaaagaggaaactctctaaacgactcgttctccggaagc
aagcgctcagctcgagccgacgctgaaaacgatgctttcgccgcgcacgaagcagaaatt
atggctcacgacggtgaaatcacagctggctacttagacatcttcagaaacgccaaagga
aactacttgtacatgttctttggtacggtgtttgccctgatcagaggtcttgaactgcct
gcgttggcgttgatctttggttgggtatttgaaggattcacttttgttccttatggagga
agaatgatgcacagaatggctatggctgttatcgcctttgcttctgttggtgttggtgtc
tggatttctcaagttattagttctgttctttttgctgttgtatctgaaaacttgtcaatg
agattccgtgtccaatcattccgcaacctcttgtaccaagatgcctcctacttcgataac
ccagctcatgctcctggaaaactcatcacccgtcttgcatcagatgctccaaatatcaaa
gcagttgttgatgctcgaatgcttcaagttatctacgctctcgctgccatcattggaaac
atcgtaatcgcttttatctattgctggcaaattggaattctgggaacatctctcatcatt
cttcttgcttttgtgatgatcgggcttgcttacaagatttctctcatgaacatcgaacaa
atcaaaaacgatgaagcaggaagaattgctattgagatcattgaaaacgtgaagactatc
cagctacttacaagaagtgaactattcttcgatcattaccaaacggcgtccaaacaacag
aaaagatcggaattgaaaaagggaatgattgaagctgtcaactacagtctctcccaatct
ttcatgtacttcatgatgtgtttcacttacgccgtcggtatccgtatcatctaccaaggt
gataagtcgccagatgacactttcaagggaatcatctcaatgatgttgggagctgttgct
gtgatgaactctgcccagtacttcccagaatttgtcaaggctaagaccgcagctggtatg
cttttcaacatcatctaccgtaaaccaagaaccggagacttgatggaaggagaccgtcca
gaaattcgaggcaatattctatttgaaaatgtcaagttctcttatccacaacgaccattg
caaccaattatgaagggacttcaatggactgctctccgcggacaaaccgttgctcttgtg
ggaccatctggatccggaaagagtacaaacattggaatgctcgaacgattctacgatgtt
actgatggagtactccgaatcgatggacaagatattcgaaatctttcgttgtaccatctc
agaacccaaatggcacttgtcggtcaagaacctcgtcttttcgcaggaacaattcgagaa
aacgtgtgtcttggcctgaaagatgtgccactcgaaaaaatcaaccaggccttagaactt
gccaatgctaatagattccttgccaacttgccagctggaattgatactgatgttggagaa
aaaggagggcagctatctggaggtcaaaagcagagaattgcaattgccagagcattggtc
agagaccccaagattctgctacttgacgaagccacttctgcgttggattctgaatctgaa
agagcagtacaagaagcattggatcgtgcccgagaaggtcgtacctgcatcacaattgcc
catcgcttatcctccatccagaactctgacctcatcgtttatatcgataagggtaaagtg
caagaagctggtaaccactcgcaattgatgcagaagaagggcagatactacaagcttatc
aaaaaacaagatcttgctgtctaa
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