Chromobacterium rhizoryzae: D1345_05960
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Entry
D1345_05960 CDS
T05688
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
crz
Chromobacterium rhizoryzae
Pathway
crz03030
DNA replication
crz03430
Mismatch repair
crz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D1345_05960
03430 Mismatch repair
D1345_05960
03440 Homologous recombination
D1345_05960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crz03032
]
D1345_05960
03400 DNA repair and recombination proteins [BR:
crz03400
]
D1345_05960
Enzymes [BR:
crz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D1345_05960
DNA replication proteins [BR:
crz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D1345_05960
DNA repair and recombination proteins [BR:
crz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D1345_05960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_30
ResIII
AAA_18
TIP49
nSTAND3
AAA_19
Rad17
Mg_chelatase
PIF1
AAA_7
TsaE
Herpes_Helicase
DUF815
AAA_24
AAA_28
RsgA_GTPase
Sigma54_activ_2
SKI
DUF3646
NTPase_1
TniB
T2SSE
Zeta_toxin
ABC_tran
VapE-like_dom
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
AXT45747
LinkDB
All DBs
Position
1316943..1318817
Genome browser
AA seq
624 aa
AA seq
DB search
MSYQVLARKWRPKRFADLVGQEHVVRALTNALKEQRLHHAYLLTGTRGVGKTTIARILAK
SLNCETGTTAEPCGECSACRQIDTGRFVDLLEIDAASNTGIDNIREVLENAQYAPTSGRF
KVYIIDEVHMLSKSAFNAMLKTLEEPPAHVKFILATTDPQKVPVTVLSRCLQFSLRNMTP
QQVAGHLAHMLDVEGIAYEAPALALLGRAAAGSMRDAQSLLDQAIAYGLGDVKEDGVRAM
LGAVDRRYLFALLQALAAGDGPQLMAQADSLAERGVSFEGALSELAVLLQQLALMQTVPQ
AIAQDEPERDALQALADAISPQDVQLYYQIAIHGRKDLALAPDEHAGFNMTLLRMLAFHP
ANTQPESAPSRPAAVASTRPQQPPAQSAPAVSGGISPAARALQAAGLSSPAPRQSAPPPA
QESAPAAEPEPEPAAPEARPAPQAAPPAKPEAADDEDDGSDGDVSPDDVPWDQGAAADEE
MPSYLQQEPEEAVDYQFDGDWQALVTELGAKLGAARMLAHNAVLKDWSQDRLALAVPESF
RHMTSRDYQDKLKLALSERFGRPVELAVTVEELGLETPAMKDARHRQEQLNIARENMKND
PVVQQMVREFDATLLIETIQPVKE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagtccttgcccgtaagtggcgtcccaagcgctttgccgatctggtcggc
caggagcacgtggtgcgcgccttgaccaacgccctcaaagaacagcgtctgcatcacgct
tatctgctgacggggacgcgcggggtgggcaagaccaccatcgcccggattctggccaag
agcctcaattgcgaaaccggcaccaccgcggagccttgcggcgagtgctcggcctgtcgt
cagatcgacaccggccgctttgtcgatttgctggagatcgacgccgcgtccaacaccggc
atcgacaatatccgcgaagtgctggaaaacgctcagtacgcgccgacttccggccgcttc
aaggtctacatcatcgacgaagtgcacatgctgtccaagagcgccttcaatgcgatgctg
aagacgctggaggagccgccggcccacgtcaaattcatcctggccaccaccgatccgcag
aaggtgccggtgacggtgttgagccgctgtctgcagttctcgctgcgcaatatgacgccg
cagcaagtggccggccatctggcccatatgttggatgtggaaggcatcgcctacgaagcg
ccggcgcttgccttgctgggccgcgcggccgccggctccatgcgcgacgcgcagtcgctg
ctggaccaagccatcgcctacggtctgggcgacgtgaaggaagacggcgtgcgcgcgatg
ctgggcgcggtggaccgccgttacctgtttgccttgctgcaggcgttggcggccggcgac
ggcccgcagctgatggcgcaagccgacagcctggccgagcgcggcgtcagctttgaaggc
gcgttgagcgaattggcggtcttgctgcagcagttggcgctgatgcagaccgtgccgcag
gcgatcgcccaggacgagccggaacgcgacgcgttgcaggcgctggcggacgccatctcg
ccgcaggacgtgcagctgtattaccagatcgccattcatggccgcaaagacttggcgctg
gcgccggacgagcacgccggtttcaatatgaccctgctgcgcatgctggccttccacccg
gccaacacgcagccggagtccgcgccgtcgcggccagccgccgtcgcgtctacgcggccg
caacagccgccagcgcagtcggccccggccgtgtctggggggatttcgccggccgcgcgc
gctttgcaggccgccggcctgagttcgccggcgccgcgtcagtccgcgccgcccccggca
caggaaagcgccccggcggcggaacccgaacccgagcctgccgcgccggaagccaggccg
gctccgcaggccgcgccgccggccaagccggaagccgcggatgacgaggacgacggtagc
gacggcgacgttagccccgacgatgtgccttgggaccagggcgccgcggcggacgaggag
atgccgtcctatctgcagcaagagccggaggaagcggtcgattatcagtttgacggcgac
tggcaggccttggtgaccgaattgggcgccaagctgggcgcggcgcgcatgctggcccat
aatgcggtattgaaggactggagccaggatcgcctggcgctggcggtgccggagagcttc
cgccacatgaccagccgcgattatcaggacaagctcaaattagcgctgagcgaacgcttc
ggccggccggtggaattggccgtgacggtggaggagctgggcctggaaacgccggcgatg
aaagacgctcgccatcggcaggagcagttgaacatcgcgcgcgagaatatgaaaaacgat
ccggtggtgcagcaaatggtgcgcgaattcgacgcgacgctgctcatcgaaaccattcaa
cccgtgaaggagtga
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