Chlorocebus sabaeus (green monkey): 103214778
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Entry
103214778 CDS
T04361
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103214778 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csab03400
]
103214778 (LIG4)
Enzymes [BR:
csab01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103214778 (LIG4)
DNA repair and recombination proteins [BR:
csab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103214778 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
103214778
NCBI-ProteinID:
XP_007959053
Ensembl:
ENSCSAG00000000211
UniProt:
A0A0D9SA95
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All DBs
Position
3:complement(86576200..86587097)
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AA seq
911 aa
AA seq
DB search
MAASPTSQTVASHVPFADLCSTLERIQKSRGRAEKIRHFREFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHG
DAGDFALIAYFVLKPRCLQKGSLTIQQVNDLLDSVASNNSAKRKDLIKKSLLQLITQSSA
LEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAVELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTD
QFGASPTEGSLTPFIHNTFKTDIQICILDGEMMAYNPNTQTFMQKGIKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRYEILCSIFTPIPGRIEIVQKTQAHTKNEVIDALNE
AIDKREEGIMIKQPLSIYKPDKRGEGWLKIKPEYVTGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKPFHKKAPPSSILC
GTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIREDKEWHECMTLDDLE
QLRGKASGKLASKHLYVGGDDGPQEKKRKAAPKMKKVIGIIEHLKAPNLTNVNKISNIFE
DVEFCVMSGTDSQPKPDLENRIAELGGYIVQNPGPDTYCVIAGSKNIRVKNIILSNKHDV
VKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSYEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTIYLDLYVVINDLSTKTEGTRLAI
KALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKILKESWVTDSIDR
CELQEENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcaccaacttcacaaactgttgcatctcacgttccttttgcagatttgtgt
tcaactttagaacgaatacagaaaagtagaggacgtgcagaaaaaatcagacacttcagg
gaatttttagattcttggagaaaatttcatgatgctcttcataagaaccaaaaagatgtc
acagactctttttatccagcaatgagactaattcttcctcagctagaaagagagagaatg
gcctatggaattaaagaaactatgcttgctaagctttatattgagttgcttaatttacct
agagatggaaaagatgccctcaaacttttaaactacagaacacccactggaactcatgga
gatgctggagactttgcattgattgcatattttgtgttgaagccaagatgtttacagaaa
ggaagtttaaccatacagcaagtaaacgaccttttagactcagttgccagcaataattct
gctaaaagaaaagacctgataaaaaagagccttcttcaacttataactcagagttcagcc
cttgagcaaaagtggcttatacggatgatcataaaggatttaaagcttggtgttagtcag
caaactatcttttctgtttttcataatgatgctgttgagttgcataatgtcactacagat
ctggaaaaagtctgtaggcaactgcatgatccttctgtaggactcagtgatatttctatc
actttattttctgcctttaaaccaatgctagctgctattgcagatattgagcacattgag
aaggatatgaaacatcagagtttctacatagaaaccaagctagatggtgaacgtatgcaa
atgcacaaagatggagatgtatataaatacttctcccgaaatggatataactatactgat
cagtttggtgcttctcctactgaaggttctcttaccccattcattcataatacattcaaa
acagatatacaaatctgtattcttgatggtgagatgatggcctataatcctaatacacaa
actttcatgcaaaagggaattaagtttgatattaaaagaatggtagaagattctgatctg
caaacttgttattgtgtgtttgatgtattgatggttaataataaaaagctagggcatgag
actctgagaaagaggtatgaaattctttgtagtatttttacaccaattccaggtagaata
gaaatagtgcagaaaacacaagctcatactaagaatgaagtaattgatgcactgaatgaa
gcaatagataaaagagaagagggaatcatgataaaacaacctctatccatctacaagcca
gacaaaagaggtgaagggtggttaaaaattaaaccagagtatgtcactggactaatggat
gaattggacattttaattgttggaggatattggggtaaaggatcacggggtggaatgatg
tctcattttttgtgtgcagtagcagaaaagccccctcctggtgagaagccatctgtgttt
catactctctctcgtgttggctctggctgcaccatgaaagaactgtatgatctgggtttg
aaactggccaagtattggaagccttttcataaaaaagctccaccaagtagcattttatgt
ggaacagagaagccagaagtgtacattgaaccttgtaattctgtcattgttcagattaag
gcagcagagatcgtacccagtgatatgtataaaactggctgcaccttgcgttttccacga
attgagaagataagagaagacaaagagtggcatgagtgcatgaccctggacgacctagaa
caacttagggggaaagcatctggtaagctcgcatctaaacacctttatgtaggtggtgat
gatggaccacaagaaaaaaagcgaaaagctgctccaaagatgaagaaagttattggaatt
attgagcacttaaaagcacctaaccttactaacgttaacaaaatttctaatatatttgaa
gatgtggagttttgtgttatgagtggaacagatagccagccaaagcctgacctggagaac
agaattgcagaacttggtggttatatagtgcaaaatccaggcccagacacgtactgtgta
attgcagggtctaagaacatcagagtgaaaaacataattttgtcaaataaacatgatgtt
gtcaagcctgcatggcttttagaatgttttaagaccaaaagctttgtgccatggcagcct
cgctttatgattcatatgtgcccatcaaccaaagaacattttgcccgtgaatatgattgc
tatggtgatagttatttcgttgatacagatttgaaccaactgaaggaagtattctcagga
attaaaaattcttacgagcagactcctgaagaaatggcttctttgattgctgatttagaa
tatcgatattcctgggattgctctcctctcagtatgtttcgacgccacaccatttatttg
gacttgtatgttgttattaatgacctgagtaccaaaactgaggggacaaggttagctatt
aaagccttggagcttcggtttcatggagcaaaggtagtttcttgtttagctgagggagtg
tctcatgtaatcattggggaagatcatagtcgtgttgcagattttaaagcttttagaaga
acttttaagagaaagtttaaaatcttaaaagaaagttgggtaactgattcaatagatagg
tgtgaattacaagaagaaaaccagtatttgatttaa
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