Chlorocebus sabaeus (green monkey): 103214863
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Entry
103214863 CDS
T04361
Symbol
UPF3A
Name
(RefSeq) UPF3 regulator of nonsense transcripts homolog A (yeast)
KO
K14328
regulator of nonsense transcripts 3
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03013
Nucleocytoplasmic transport
csab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103214863 (UPF3A)
03015 mRNA surveillance pathway
103214863 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103214863 (UPF3A)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
103214863 (UPF3A)
mRNA cycle factors
P-body specific factors
103214863 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
103214863
NCBI-ProteinID:
XP_007959222
Ensembl:
ENSCSAG00000017388
LinkDB
All DBs
Position
3:92066229..92089868
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AA seq
463 aa
AA seq
DB search
MRSEKEGAGGPRAAVAARGPCGREKLSALEVQFHRDSPQREAETQPTSSSGCGGGAGKPR
EEKRTALSKVVIRRLPPGLTKEQLEEQLRPLPAHDYFEFFAADLSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFLDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKF
LETYCVEEEKTSANPETLLGEMEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERR
RRELEKKRLREEEKRRRREEERCKKKEADKQKKIAEKEVRIKLLKKPEKGEEPTAEKPKE
RGEEIDTGGGRPVEGSLEESQEMSRSGSDREYRDLERSQEKECEAQRHHVDDGRRHRAPH
EPDWLSRRSEDEQRWGKGPGQDRGKKGSQDSGAPGQAMERLGRAQRCDDGPAPRKERLAN
KDRPALQLYDPGARFRARECGGSGRICKAEGSGTGPEKREEAE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggaaaaggagggggccggaggccctagggcggcagttgccgcgcggggaccg
tgcgggagggaaaagctgtcggccctagaagtacagttccaccgcgactcgccgcagcgg
gaagctgagacgcagccaacctcgtcctccggttgcgggggcggtgcgggcaaacctcgc
gaggagaagaggacggccctgagtaaggtggtcatccgccgcctgcccccgggcctcacc
aaggagcagctggaggagcagctgcgcccgctgccagcgcacgactacttcgagttcttc
gccgccgacctgagtctttatcctcatctctactcaagagcatacattaattttaggaat
cctgatgacatccttctttttagagatcgttttgatggatatatcttccttgacagcaaa
ggcctagaatatcctgcagtggtagagtttgctccgttccagaagatagccaaaaagaag
ctgaaaaaaaaagatgccaagactggaagcatcgaagatgatccagaatataagaagttt
ttagaaacttactgtgtggaggaagagaagaccagcgccaaccctgagactctgctgggg
gagatggaggccaagacaagagagctcattgctagaagaacaacacctcttttggaatat
attaaaaacagaaaattagaaaagcagagaattcgagaagagaagcgagaagaacggagg
aggagagagttagaaaagaaacgtttgcgggaagaggaaaaaagaagaagaagagaagaa
gaaagatgcaaaaaaaaggaggcagataaacagaagaaaattgcagagaaagaagtaagg
attaagcttcttaaaaaaccagaaaagggagaggaaccaaccgcagagaaaccgaaagaa
agaggagaggagattgatactggaggtggcaggcccgtggaaggctcgctggaggagtcc
caggagatgtcacgcagcggcagtgatagagagtacagggatctggagagatctcaagaa
aaagaatgtgaagcacaaagacaccatgtggatgacggcaggaggcacagagctccccac
gagcctgactggctttccagaaggagtgaggatgagcagagatgggggaaaggacctggc
caagacagagggaagaaggggagccaggacagcggggctccggggcaggccatggagaga
ctgggaagagcgcagaggtgtgacgacggtccggcacccagaaaggagcgactggcaaac
aaggaccggccggccttgcagctgtatgatccaggagctcgcttccgagcacgagagtgt
ggcggaagtgggaggatctgcaaggcagaaggttcggggactggtcctgagaagagggaa
gaggcagagtga
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