Chlorocebus sabaeus (green monkey): 103224788
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Entry
103224788 CDS
T04361
Symbol
NDC1
Name
(RefSeq) NDC1 transmembrane nucleoporin
KO
K14315
nucleoporin NDC1
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03013
Nucleocytoplasmic transport
csab05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103224788 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103224788 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103224788 (NDC1)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103224788 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
103224788
NCBI-ProteinID:
XP_007976878
Ensembl:
ENSCSAG00000001293
UniProt:
A0A0D9S783
LinkDB
All DBs
Position
20:79097579..79165732
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AA seq
674 aa
AA seq
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MATAVSGPCAGRSRDILWRVLGWRIVASIVWSVLLLPLCTTVFIIFSRIDLFHPVQWLSD
SFSDLYSSYVIFYLLLLSVVIIIISIFNVEFYAVVPSIPCSRLALIGKIIHPQQLMHSFI
HAAMGMVMAWCAAVITQGQYSFLVVPCTGTNSFSSPAAQTCLNEYHLFFLLAGAFMGYSY
SLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFLVRNFCILYYFLGYIPKA
WISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHVWLCGVFLLMTWYISWILFKIYATEAHV
FPVQPPFAEGSDECLPKVLNSNPPPIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPH
NWTAISRECLNLLNGMTQKLVLYQEAAATNGRVSSSYPVEPKKLNSPEETTFQTPQSSQM
LRPSVPPLVKTSLFSSKLSTPDVVSPLGTPFGSSVMNRMAGIFDVNTCYGSPQSPQLIRR
GPRLWTSASDQQMTEFSNPSPSTSISAEGKTTRQPSVIYSWIQNKREQVKNFLSKRVLIM
YFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQE
AADKYFKLPHASSKPPRISGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASA
EHQKRLQQFLEFKE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggccacggccgtgagtgggccctgcgctggcaggtcgcgggacatattgtggcgcgtt
ttgggctggaggatagttgcaagtattgtttggtcagtgctgcttctacccctctgcacc
acagtatttataattttcagcaggattgatttgtttcatcctgtacagtggctgtctgat
tctttcagcgacctgtatagttcctatgtaatcttttacctcctgctgctgtcagtggta
ataataattataagtattttcaatgtggagttctatgcagttgtgccttctattccttgc
tccagacttgctctgatagggaagatcattcatcctcagcaactcatgcactcatttatt
catgctgcaatgggaatggtgatggcctggtgtgctgcagtgataacccagggccaatac
agttttctcgtggtcccctgcactggtactaacagctttagtagccctgctgcgcaaacc
tgcttaaatgaatatcatctttttttcctactggctggagcatttatgggctatagctat
agcctcttgtattttgttaacaacatgaactatcttccatttcccatcatacagcaatac
aagttcttgcgttttaggagatctctgcttttactagttaaacacagttgtgtggaatca
ctgttcctggttagaaatttctgcattttatattattttcttggctatattcccaaagct
tggattagcactgctatgaaccttcacatagatgagcaggttcataggccacttgacaca
gtgagtggcctcttaaatctctcactactctaccatgtctggctgtgtggtgtctttctc
ctaatgacttggtatatctcatggatactcttcaaaatctatgccacagaggctcatgtg
tttcctgttcaaccaccatttgcagaagggtcagatgagtgccttccgaaagtgttaaat
agcaatcctccccccatcataaagtatttagccttgcaggacctgatgttgctttctcaa
tattctccttcacgaagacaagaagtttttagcctcagccaaccaggtggacatccccac
aattggacagccatttcaagggagtgtttgaatcttttaaatggtatgactcagaaactg
gttctctatcaagaagctgctgctacaaatgggagagtgtcttcatcttacccagtggaa
cctaagaaattaaattctccagaagaaactacttttcagacaccacaatctagccagatg
cttcggccttcagtgccaccattagttaaaacatcactgttttcttcaaaattgtctaca
cctgatgttgtgagtccccttgggaccccgtttggctctagtgtaatgaatcggatggct
ggaatttttgatgtaaacacttgctatgggtcaccacaaagtcctcagctaataagaagg
gggccaagattatggacatcagcttctgatcagcaaatgactgaattttctaatccttct
ccatctacctctattagtgctgagggtaagacaacgagacagcccagtgtgatttattca
tggattcagaataaacgtgaacaggttaagaatttcttgtcaaaacgggtgctgataatg
tattttttcagtaagcacccagaggcctccattcaggctgttttttcagatgcccaaatg
catatttgggcattagaaggtctgtcgcacttagtagcagcatcatttacagaggataga
tttggagttgtccagactacactaccagctatccttaatactttgttgacgctgcaagag
gcagccgacaagtactttaagcttcctcatgcttccagtaaaccaccccggatttcagga
agccttgtggacacttcatataaaacattaagatttgcattcagagcatcactaaaaact
gccatctatcgaataactactacatttggtgaacatctgaatgctgtgcaagcatctgca
gaacatcagaaaagacttcaacagttcttggagttcaaagaatag
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