KEGG   Chlorocebus sabaeus (green monkey): 103224788
Entry
103224788         CDS       T04361                                 
Symbol
NDC1
Name
(RefSeq) NDC1 transmembrane nucleoporin
  KO
K14315  nucleoporin NDC1
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03013  Nucleocytoplasmic transport
csab05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103224788 (NDC1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    103224788 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csab03019]
    103224788 (NDC1)
Messenger RNA biogenesis [BR:csab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103224788 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup GP41
Other DBs
NCBI-GeneID: 103224788
NCBI-ProteinID: XP_007976878
Ensembl: ENSCSAG00000001293
UniProt: A0A0D9S783
LinkDB
Position
20:79097579..79165732
AA seq 674 aa
MATAVSGPCAGRSRDILWRVLGWRIVASIVWSVLLLPLCTTVFIIFSRIDLFHPVQWLSD
SFSDLYSSYVIFYLLLLSVVIIIISIFNVEFYAVVPSIPCSRLALIGKIIHPQQLMHSFI
HAAMGMVMAWCAAVITQGQYSFLVVPCTGTNSFSSPAAQTCLNEYHLFFLLAGAFMGYSY
SLLYFVNNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFLVRNFCILYYFLGYIPKA
WISTAMNLHIDEQVHRPLDTVSGLLNLSLLYHVWLCGVFLLMTWYISWILFKIYATEAHV
FPVQPPFAEGSDECLPKVLNSNPPPIIKYLALQDLMLLSQYSPSRRQEVFSLSQPGGHPH
NWTAISRECLNLLNGMTQKLVLYQEAAATNGRVSSSYPVEPKKLNSPEETTFQTPQSSQM
LRPSVPPLVKTSLFSSKLSTPDVVSPLGTPFGSSVMNRMAGIFDVNTCYGSPQSPQLIRR
GPRLWTSASDQQMTEFSNPSPSTSISAEGKTTRQPSVIYSWIQNKREQVKNFLSKRVLIM
YFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTLPAILNTLLTLQE
AADKYFKLPHASSKPPRISGSLVDTSYKTLRFAFRASLKTAIYRITTTFGEHLNAVQASA
EHQKRLQQFLEFKE
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggccacggccgtgagtgggccctgcgctggcaggtcgcgggacatattgtggcgcgtt
ttgggctggaggatagttgcaagtattgtttggtcagtgctgcttctacccctctgcacc
acagtatttataattttcagcaggattgatttgtttcatcctgtacagtggctgtctgat
tctttcagcgacctgtatagttcctatgtaatcttttacctcctgctgctgtcagtggta
ataataattataagtattttcaatgtggagttctatgcagttgtgccttctattccttgc
tccagacttgctctgatagggaagatcattcatcctcagcaactcatgcactcatttatt
catgctgcaatgggaatggtgatggcctggtgtgctgcagtgataacccagggccaatac
agttttctcgtggtcccctgcactggtactaacagctttagtagccctgctgcgcaaacc
tgcttaaatgaatatcatctttttttcctactggctggagcatttatgggctatagctat
agcctcttgtattttgttaacaacatgaactatcttccatttcccatcatacagcaatac
aagttcttgcgttttaggagatctctgcttttactagttaaacacagttgtgtggaatca
ctgttcctggttagaaatttctgcattttatattattttcttggctatattcccaaagct
tggattagcactgctatgaaccttcacatagatgagcaggttcataggccacttgacaca
gtgagtggcctcttaaatctctcactactctaccatgtctggctgtgtggtgtctttctc
ctaatgacttggtatatctcatggatactcttcaaaatctatgccacagaggctcatgtg
tttcctgttcaaccaccatttgcagaagggtcagatgagtgccttccgaaagtgttaaat
agcaatcctccccccatcataaagtatttagccttgcaggacctgatgttgctttctcaa
tattctccttcacgaagacaagaagtttttagcctcagccaaccaggtggacatccccac
aattggacagccatttcaagggagtgtttgaatcttttaaatggtatgactcagaaactg
gttctctatcaagaagctgctgctacaaatgggagagtgtcttcatcttacccagtggaa
cctaagaaattaaattctccagaagaaactacttttcagacaccacaatctagccagatg
cttcggccttcagtgccaccattagttaaaacatcactgttttcttcaaaattgtctaca
cctgatgttgtgagtccccttgggaccccgtttggctctagtgtaatgaatcggatggct
ggaatttttgatgtaaacacttgctatgggtcaccacaaagtcctcagctaataagaagg
gggccaagattatggacatcagcttctgatcagcaaatgactgaattttctaatccttct
ccatctacctctattagtgctgagggtaagacaacgagacagcccagtgtgatttattca
tggattcagaataaacgtgaacaggttaagaatttcttgtcaaaacgggtgctgataatg
tattttttcagtaagcacccagaggcctccattcaggctgttttttcagatgcccaaatg
catatttgggcattagaaggtctgtcgcacttagtagcagcatcatttacagaggataga
tttggagttgtccagactacactaccagctatccttaatactttgttgacgctgcaagag
gcagccgacaagtactttaagcttcctcatgcttccagtaaaccaccccggatttcagga
agccttgtggacacttcatataaaacattaagatttgcattcagagcatcactaaaaact
gccatctatcgaataactactacatttggtgaacatctgaatgctgtgcaagcatctgca
gaacatcagaaaagacttcaacagttcttggagttcaaagaatag

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