Chitinophaga sancti: SIO70_09135
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Entry
SIO70_09135 CDS
T09582
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac
Chitinophaga sancti
Pathway
csac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SIO70_09135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csac03021
]
SIO70_09135
Transcription machinery [BR:
csac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SIO70_09135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_23
HTH_28
HTH_10
HTH_40
HTH_17
Xre-like-HTH
HTH_7
TnsD
HTH_24
HTH_Tnp_ISL3
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
WPQ65015
LinkDB
All DBs
Position
2176633..2177208
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AA seq
191 aa
AA seq
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MSNNENIRLWQQQIADDGDEKAFASLFRHYYERLLHFCMQYVSTREAAEEIVSDVFVKIW
NRRAGLDAISNLEVYLFVAVKNHSLNYLEQYSNLRITPLNDDTGLAGLTTTDPEKTMEWK
EILFKMDQEVNRLPDQCRRVFKLIKEEGFKYKDVAEILNISPRTVETQLFRAMKRLNEVI
GPFVSLKAKKK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaatgaaaacatccgtttatggcaacagcaaatagctgatgatggtgatgaa
aaagctttcgcctcgctattccgtcactattacgaacgactactgcacttctgcatgcaa
tacgtgtccacgcgcgaagctgcggaagaaatcgtctcggacgtgttcgtgaagatctgg
aaccgacgtgccgggctggatgctatttccaacctggaagtatacctgttcgtagctgtc
aaaaatcattctctcaattatctggaacaatattccaaccttagaattactccactaaat
gatgatactggtttagccggactgaccactacagacccggagaaaacgatggaatggaaa
gagatcctcttcaaaatggatcaggaagtaaaccgtctgccggatcaatgtcggcgggtg
tttaaactgattaaagaagaaggatttaaatataaagatgtggctgaaattcttaacatc
tctccacgcactgtcgaaacccaattattcagagcgatgaagcgattgaatgaagtgatc
gggccattcgtttcactgaaagcaaaaaagaagtag
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