Chitinophaga sancti: SIO70_30875
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Entry
SIO70_30875 CDS
T09582
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac
Chitinophaga sancti
Pathway
csac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SIO70_30875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csac03021
]
SIO70_30875
Transcription machinery [BR:
csac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SIO70_30875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
HTH_23
KORA
GerE
HTH_37
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WPQ62766
LinkDB
All DBs
Position
complement(7708795..7709382)
Genome browser
AA seq
195 aa
AA seq
DB search
MQATTDTELLQRLRKGDESAFRQLYDRHSRPVAAFIYQLTHSAVDAEDILQDTFLKLWTS
REQLPAIDHIGNYIFIIARNKTVDHLRKVARQQHLVDQVWANISEVADALDLQLDARESQ
QLIFNALAQLSDQKQTIFRLSRVEGLSHEDIATKLGLSKSRVKNLQVETLKHIRVFLSRY
GGPLGVLLFTCLMKS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctaccacggatacggaattactacaacgactgcggaaaggggacgaaagtgcc
ttccggcagttatatgaccggcatagcaggccggtagctgcgtttatataccagttaacc
cactcggcagtagatgccgaggatatccttcaggatacctttctcaagctctggaccagc
cgggaacagcttccagccatcgatcatattggcaactacatctttatcattgcccgcaat
aaaacggtcgatcacctccgcaaggtggcccgccagcagcacctggtagaccaggtttgg
gccaatatctcagaagtggcggatgccctcgacctgcaactcgatgccagggagagccag
caactcattttcaatgccctcgcacaattgtctgatcagaaacagaccattttccgcctc
agcagggtagaggggctgagtcatgaggatattgccacaaagctgggtttgtccaaaagc
agggtcaagaatttacaggtcgaaaccctgaaacatatccgtgtgttcctgtcacgttat
ggaggtccgctgggggtactcctgttcacatgcttaatgaaaagctaa
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integrated database retrieval system
