Cololabis saira (Pacific saury): 133420415
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Entry
133420415 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133420415
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133420415
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_5
HpHbR
Prok-RING_4
Gp58
LMBR1
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
133420415
NCBI-ProteinID:
XP_061566093
LinkDB
All DBs
Position
20:complement(8426703..8429633)
Genome browser
AA seq
554 aa
AA seq
DB search
MSEKRVEVDGEMICCSICLDLLKDPGTIPCGHNYCMDCIKTHWDGEDGRGTHSCPLCRKT
FTPRPVLVRNSMLAELVEEMKKTGLQADLCYAGPEDVTCDVCTGRKVKAVQSCLVCLASY
CEKHLQPHYDAPAFQKHQLVDPSKKLQENICSLHHEVMKIFCRTDQQSICYLCAMDEHKG
HETVAAAAERCEKQKELEVSRQQIQQRIQDREKGVELLQQEVEDINVSADKAVEDSEKTF
NEVIRLLQKSSSDVKQQVRSQQEHEVSRVKDLQEKLQQEITDLKRREAELEKLSHTEDLN
QFLHNYPSPSPLSGSTLSSSIQIRPLRYFEDVTAAVSETREKLQDLLRETWTNISLSVAE
VDVLLSEPEPKTRDGFLKHSQDITLDPNTAHKHLFISDANRKVTLMKKELSYCDNPGRFT
NWWQVLSKQSMSGRCYWEVEVRGEAVCVAVAYKNISRAGNLQGCGFGYNQESWALQCYTD
GYTLRYNNIKTPVSGPPSSRVGVYLDHGAGLLSFYSVSETMTLLHRVQTTFTQPLHAGLW
LSYRGASVEVVKLK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaaaagagttgaagtggacggagaaatgatctgttgttccatctgtctggat
ctactgaaggatccggggacgattccctgtggacacaactactgcatggactgtattaaa
acccactgggatggagaggatgggaggggaacccacagctgtcctctgtgcaggaagacc
ttcacgcccaggcccgtcctggtgagaaacagcatgttagcagagttagtggaggagatg
aagaagactggactccaagctgatctctgctatgctggacctgaagatgtgacctgtgat
gtctgcactgggaggaaggtgaaagctgtccagtcctgtttggtctgtctggcctcttac
tgtgagaaacatctccaacctcactatgatgctcctgcttttcaaaaacaccagctggtg
gatccctccaagaagctccaggagaacatctgctctctccaccatgaggtgatgaagatc
ttctgtcgtaccgatcagcagagtatctgttatctgtgtgcaatggatgaacataaaggt
catgaaacagttgcagctgcagcagaaagatgtgagaagcagaaggagctggaggtgagt
cgacaacaaatccagcagagaatccaggaccgagagaaaggcgtggagctgcttcagcag
gaggtggaggacatcaacgtctctgctgataaagcagtggaggacagtgagaagaccttc
aacgaggtgatccgtctcctccagaaaagcagctctgatgtgaagcagcaggtcagatcc
cagcaggaacatgaagtgagtcgagtcaaagatcttcaggagaaactgcaacaggagatc
actgacctgaagaggagagaagctgagctggagaagctctcacacacagaggacctcaac
cagttcctccacaactacccctcaccgtcacccctcagtggctccacactctcatccagc
atccagattcgtcctctcaggtactttgaggacgtgacagcagctgtgtcagagaccaga
gagaaactacaggaccttctgagagagacgtggacaaacatctcactgtcagtggctgaa
gtagatgttttactgtcggaaccagaaccaaagaccagagatggattcttgaaacattct
caagacatcactctggatccaaacacagctcacaaacatctgtttatatctgatgccaac
agaaaagtgactttaatgaaaaaagaactgtcttattgtgataatccaggcagattcact
aattggtggcaagtgctgagtaagcagagtatgagtggacggtgttactgggaggtggag
gtgagaggagaagcagtttgtgttgcagtggcgtacaagaacatcagcagagcggggaac
ctgcaaggttgtgggtttggatataaccaggaatcttgggcgttacaatgttacacagac
ggttacacactgcggtacaacaacattaaaactcctgtttcaggtcctccttcctccaga
gttggagtgtacctggaccacggagctggtcttctgtccttctacagcgtctctgagacc
atgaccctcctccacagagtccagaccacattcacccagccgctccacgctggactctgg
ctttcatatcgtggagcgtctgttgaggtcgtgaagttgaagtag
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integrated database retrieval system
