Cololabis saira (Pacific saury): 133420806
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Entry
133420806 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133420806
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133420806
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-B_box
Gp58
DUF2937
LMBR1
Motif
Other DBs
NCBI-GeneID:
133420806
NCBI-ProteinID:
XP_061566625
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All DBs
Position
20:3494559..3497922
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AA seq
470 aa
AA seq
DB search
MAEKGGDVACDVCTGRKVKAVQSCLVCLASYCEKHLQPHYDAPAFKKHQLVDPSKKLQEN
ICSLHHEVMKIFCRTDQQSICYLCSMDEHKGHETVAAATERSERQKELEVSRQQIQQRIQ
GREKDVELLQQEVEDINVSADKAVEDSEKSFDEVIRLLQKSSSDVKQQVRSQQEHEVSRV
KDLQEKLQQEITDLKRRDAEMKQLSDTEDHNQFLHNYPSQSPLSGSTLSSSIQIRPLRYF
EDVTAAVSETREKLLDLLRETWTNISLSVAEVDVLLSEPEPKTRAGFLKFSQDITLDPNT
AHEQLFLSDGNRKVTLLNRQKSLSSHPDRFTTWWQVLSKESVTERCYWEVEFRGGGIRVA
VAYKNISRAGSSDDCGFGHNDKSWALHCETSSYSVCHSNYQLSTRVSGPPSTRVGVYLDH
GAGLLSFYSVSETMTLLHRVQTSFTQPLHAGLWLDYADENTAEFVSTIAC
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaggaggagacgttgcctgtgacgtctgcactgggaggaaggtgaaagct
gtccagtcctgtctggtctgtctggcctcttattgtgagaaacatctccaacctcactat
gatgctcctgcttttaaaaaacaccagctggtggatccctccaagaagctccaggagaac
atctgctctctccaccatgaggtgatgaagatcttctgtcgtaccgatcagcagagtatc
tgttatctgtgttcaatggatgaacataaaggtcatgaaacagttgcagctgcaacagaa
agatctgagaggcagaaggagctggaggtgagtcgacaacaaatccagcagagaatccag
ggccgagagaaagacgtggagctgcttcagcaggaggtggaggacatcaacgtctctgct
gataaagcagtggaggacagtgagaagagcttcgacgaggtgatccgtctcctccagaaa
agcagctctgatgtgaagcagcaggtcagatcccagcaggaacatgaagtgagtcgagtc
aaagatcttcaggagaagctgcagcaggagatcactgacctgaagaggagagacgctgag
atgaagcagctctcagacaccgaggaccacaaccagttcctccacaactacccctcacag
tcacccctcagtggctccacactctcatccagcatccagattcgtcctctcagatacttt
gaggatgtgacagcagctgtgtcagagaccagagagaaactactggaccttctgagagag
acgtggacaaacatctcactgtcagtggctgaagtggatgttttactgtcggaaccagaa
ccaaagaccagagctggattcttaaagttttcacaagacatcactctggatccaaacaca
gctcacgaacaattgtttctgtctgatgggaacagaaaagtaacactactgaacagacaa
aagtctctttccagtcatccagacagattcactacttggtggcaagtgctgagtaaagaa
agtgtgaccgaacgttgttactgggaggtggaatttagaggaggaggaattcgtgttgca
gttgcgtacaagaacatcagcagggcagggagctcagatgactgtgggtttggacacaat
gacaaatcctgggcgttacattgtgaaacaagcagttattcagtttgccacagcaactat
caactatcaactcgcgtctcaggtcctccttccaccagagttggagtgtacctggaccac
ggagctggtcttctgtccttctacagcgtctctgagaccatgaccctcctccacagagtc
cagacctccttcacccagccgctccacgccggactctggcttgattatgctgatgaaaac
actgctgagtttgtttccactattgcttgctga
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