Cololabis saira (Pacific saury): 133422459
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Entry
133422459 CDS
T09849
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133422459
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133422459
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
133422459
NCBI-ProteinID:
XP_061568442
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All DBs
Position
21:29047322..29102761
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AA seq
487 aa
AA seq
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MLMSTDVASLMLPVNRGMMERERDMEAAAAAGAHAAAAAAAAAAAAGGPAGGPAGLRGMK
RGDPEPDPAQAAPALTDLAGAECKRPRIDGTGSVVVADIGQNNEPLNPGFHGYAPHSQGS
QDSTGGQEALVAPPFTTFPPPPPPQNGLPGAEFGPGAMFGAGGQVAAEVGAGANGATSTP
TSNNGKTEETSQGEVGVQCSAGGTGAGGSAGDSSEAKGTPKRLHVSNIPFRFRDPDLRQM
FGQFGKILDVEIIFNERGSKGFGFVTFENSADAEKAREKLHGTLVEGRKIEVNNATARVM
TNKKMVSPYPNGEALSTLPYAGWKLSPMVGAVYGPEIYADLLLSSSSSPPVPGFPYSSAA
AAATTAAAAFRGAHLRGRGRPVYSAVRAAVPQPAIPTYPGVVYQDGFYGAADLYGGYPAA
AAAAAAYRYAQPAAVTGATAAAAAYSDSYGRVYTTDPYHALTPAAAAYGVGAMASLYRAG
YSRFAPY
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcatctctaatgcttcccgttaaccgggggatgatggag
cgggagagggacatggaagccgcggcggccgccggggctcacgccgccgccgccgcggcc
gccgccgccgctgcggccgggggtccggccggggggccggccgggctccgggggatgaag
cgcggggatccggagccagacccagcccaggcggcccctgccctcaccgatctggccggg
gctgagtgtaagagaccgaggatagacggcaccggcagcgtggtggtggctgacattgga
cagaacaatgagcctttaaacccgggtttccatggatacgcacctcacagtcagggctct
caggattcaaccggaggacaggaggctttggtggccccacccttcacaaccttccctcct
ccacctcctcctcaaaacgggctgccaggagcagagtttggcccgggggccatgtttggt
gctgggggccaagttgcagcagaggtaggggctggtgccaatggagccacctcaacaccc
accagcaacaatggaaagacggaggagacgtctcagggtgaggtgggggtgcagtgcagt
gcaggaggaaccggagcagggggctccgcaggagactcctcagaggccaaggggaccccc
aaacggctgcacgtctcaaacatccccttccgcttccgggacccagatctcaggcagatg
tttgggcaatttgggaagattctggatgtagagattattttcaatgagaggggttcaaag
ggttttggctttgtgacatttgaaaatagcgcagacgcagagaaagccagggaaaagctc
cacggcactctggtggaaggtcgtaagattgaggtgaataacgccactgccagggtgatg
actaacaagaaaatggtcagcccctaccctaacggagaggctctcagcacgctgccttat
gcagggtggaagctgagtcctatggtcggggccgtttacgggccggagatctacgcagat
ttgctcctgtcctcctcctcctcgcctccagtcccggggttcccctactcgtcagctgcg
gcagcagccacgacggcggcggctgcgttccgcggcgcccacctcaggggccggggccgg
cccgtttacagcgccgtgcgggccgctgttcctcagcctgccatccccacctaccctggc
gtggtgtatcaggatgggttttacggagccgcagacctgtatggaggctaccctgctgct
gctgccgctgccgccgcctatcgctacgcccagcctgccgccgtaaccggagcaaccgct
gcagctgctgcctacagtgacagttacggccgggtgtacaccacagatccgtaccacgct
ctgactccagctgctgctgcgtacggcgtgggagccatggcgagtttataccgagcggga
tacagcaggttcgctccgtactaa
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