Cololabis saira (Pacific saury): 133422668
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Entry
133422668 CDS
T09849
Symbol
stx1b
Name
(RefSeq) syntaxin-1B isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
133422668 (stx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133422668 (stx1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133422668 (stx1b)
Membrane trafficking [BR:
csai04131
]
SNARE
Syntaxin (Qa)
Stx-PM
133422668 (stx1b)
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
133422668 (stx1b)
Exosomal proteins of other body fluids (saliva and urine)
133422668 (stx1b)
BRITE hierarchy
Motif
Pfam:
Syntaxin
SNARE
AAA_13
Syntaxin_2
Lzipper-MIP1
Relaxase_C
GNVR
YtxH
Baculo_PEP_C
DUF6842
FapA
TolA_bind_tri
ETRAMP
Motif
Other DBs
NCBI-GeneID:
133422668
NCBI-ProteinID:
XP_061568674
LinkDB
All DBs
Position
21:6805946..6850438
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AA seq
315 aa
AA seq
DB search
MKDRTAELRSAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAVFTDDI
KMDSQMTKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQVGGAAAAGSGRVTRG
AHAYTGLCFVFQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSQARKKKIMIIICCVI
LGVVLASTIGGTLGL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgtacggcggaactgcgaagcgctaaggacagcgatgacgatgaggaggtg
gtgcaggtcgacagggaccacttcatggacgagttctttgagcaggtggaggagatccga
ggctgcatagagaagctgtcggaggatgtggagcaggtcaagaagcagcacagcgccatc
ctggccgcgcccaaccctgatgagaagaccaagcaggagttggaggacctcacagctgac
atcaagaagacagccaataaagttcgctcaaaattaaaagcaatcgagcagagtatcgag
caggaggagggcctcaacagatcatcagcggacctcaggatccgcaaaacacagcactca
acgctgtcgcgcaagtttgtggaggtgatgaccgagtacaacaccacgcagtccaagtac
cgcgaccgctgcaaggaccgcatccagagacagctagagatcactggaagaaccaccacc
aacgaggagctcgaggacatgctggagagtggcaagttggccgtcttcaccgatgatatc
aagatggactctcagatgaccaagcaggccctgaacgagatcgagacccggcacaccgag
atcatcaagctggagaacagcatccgcgagctgcacgacatgttcgtggacatggccatg
ctggtggagagccaggtgggtggcgccgccgcagcaggaagtgggcgtgtcaccagagga
gctcacgcttacactggtttgtgctttgtgttccagggagagatgattgacagaatcgag
tacaacgtggagcactccgtcgactacgtagagcgggccgtctccgacaccaagaaggcc
gtcaaataccagagccaggctcgcaagaagaagatcatgatcatcatctgctgcgtcatc
ctcggcgtggtcttggcgtcaactatcggcggcacgctgggtctctag
DBGET
integrated database retrieval system