Cololabis saira (Pacific saury): 133424176
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Entry
133424176 CDS
T09849
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133424176
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133424176
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-RING_5
U-box
Trypan_PARP
zf-RING_6
zf-ANAPC11
DUF4200
LMBR1
OmpH
MRP-S31
FapA
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
133424176
NCBI-ProteinID:
XP_061570607
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All DBs
Position
23:complement(30773484..30775181)
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AA seq
565 aa
AA seq
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MAQKGDHQEAFSCSICLEVLKDPVTIPCGHSYCMNCIKTYWDEEEKNLPSCPQCRQTFTP
RPELVKSTMFAALLEQLKKIGLQAAPADHCYAVPEDVACDVCSERKLKAVKSCLVCLASY
CQKHLQPHCDAAPLKKHQLVDPSKNLQDNICPRHAEVRKMFCRTDQKCICYLCSVEEHKG
HDIVSAAAERTERQREMEVSQQQIQQQIQDREKDVKLLQQEVDAINQSADKTVEDSEEMF
TELISLLQKKSSEVKQHIRSQQETEVRRVRELEEKLQQEITDLKRRYAEMKQLSDTEDHN
QFLHSCLSLSPLNESTHSSGISIHPFRYFEDVTAAVSEVRGRLQYILRDIWTNVSLAVTD
VDVLLSQPKPEPQPEPEPQPEPESRAGFLKYSCEITLDPNTVNERLFLSEENRKVTVMDE
DQSYSDHPDRFTYVHQVLSRESLTGRRYWEVKMTVDGVCVAVSYKNISRSGEESGFGCND
KSWSLDCEPDGYRFWYNDIHTLISGPWTSRIGIYLDHRAGVLSFYSVSGTMTLLHRVQTT
FTQPLHAGVWVNYPPGNSAEFCKLK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagatcaccaggaagccttttcttgttccatctgtttggaggtttta
aaggatccagtgactattccctgtggacacagttactgtatgaactgtattaaaacctac
tgggatgaagaggagaagaatctccccagctgtcctcagtgtagacagacgttcaccccg
agacctgagctggtgaaaagcaccatgtttgctgctttattggagcagctgaagaagatt
ggactccaagctgctcctgctgatcactgctatgcagtacctgaagatgtggcgtgtgat
gtctgctctgagagaaaactgaaagctgtcaagtcctgtttggtctgtctggcctcttac
tgccagaaacaccttcaacctcactgtgatgcggctccattaaagaaacaccagctggtg
gatccctccaagaacctgcaggacaacatctgcccccgtcacgctgaggtgaggaagatg
ttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggaggaacataaaggc
cacgacatagtctcagctgcagcagaaaggaccgagaggcagagagagatggaggtgagt
caacaacaaatccagcagcagatccaggacagagagaaagatgtgaagctgcttcagcag
gaggtggatgccatcaatcagtctgctgataaaacagtggaggacagtgaggagatgttc
actgaactgatctctctcctccagaagaaaagctctgaggtgaagcagcatatcagatcc
cagcaggaaactgaagtaaggagagtcagagagttggaggagaagttgcagcaggagatc
actgacctgaagaggagatacgctgagatgaagcagctctcagacaccgaggaccacaac
cagtttctgcacagctgcctctcactgtcaccactcaatgagtccacacactcctccggc
atcagcatccatcctttcaggtactttgaggatgtgactgcagctgtgtcagaggtcaga
ggtcgactacagtacatcctgagagacatatggacaaacgtctcactggccgtcactgat
gtggatgttttactgtcacaaccaaaaccagaaccacaaccagaaccagaaccacaacca
gaaccagagagcagagctggattcttgaagtattcatgtgaaataactctggatccaaac
acagtaaacgaacggctgtttctgtcagaggagaacagaaaggtaacggttatggacgaa
gatcagtcttattctgatcatccagacagattcacttatgttcatcaggtcctgagtaga
gagagtctgactggacgtcgttactgggaggtgaagatgacagtagatggagtttgtgta
gcagtttcatacaagaatatcagcagatcaggggaggaaagtggatttggatgtaatgac
aaatcttggtcactagattgtgaaccagacggttatagattctggtacaacgacatccac
accctcatctcaggtccttggacctccagaataggaatttacctggatcacagagcaggt
gttctgtccttctacagtgtctctggaaccatgaccctcctccatagagtccagaccacc
ttcactcagccgctccacgctggagtttgggttaactaccctccgggaaactcagctgag
ttctgtaaactcaaatag
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