Cololabis saira (Pacific saury): 133433418
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Entry
133433418 CDS
T09849
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133433418 (rbfox1l)
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133433418 (rbfox1l)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
133433418
NCBI-ProteinID:
XP_061572955
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All DBs
Position
3:27685944..27701413
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AA seq
383 aa
AA seq
DB search
MLSSPTVILQPYGLPVYPQTTTCYPSIVQGGPAQEAGPGTGDPGLPQVYAPPPSYPPPSQ
GPPTSAGRLPTLDFSPVHPGSEYPEHPQLRVYQGPQHEGADGLTSSNTEDALVPVTSDQS
LSVSVSSGGGAGSGSEEEGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFESAAEADRAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNGDISA
ASGWKINPVMGAMFAPELYTVASFPYPVATPTLAYRGSALRGRGRAVYNTIRSAATPTAM
PAYPGVVYQDGLYGTEVYGGYPAAAYRVAQSASAATATYSDGYGRVYATAADPYHHSVGP
TTTYGVGTMASLYRGGYNRFTPY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctctcctcacccactgtgatcctccagccttatggactccccgtctacccacagaca
accacatgctaccccagcatagttcagggaggccccgcacaggaggccgggcccggcacc
ggggacccgggtctgccccaggtctacgccccacccccctcttatcctccaccaagtcaa
ggaccaccaacatcagctggcagactgcccacgcttgactttagccctgtgcatcccggt
tcagagtaccctgaacacccgcagctccgagtctatcagggccctcagcacgaaggggcc
gacggcctgacatccagtaacacggaagatgctctggtccctgtgacgtctgaccagtct
ctgagcgtgtctgtgtcatcggggggtggagcgggaagcgggagtgaagaggagggctca
ggtaaagcccaacccaagcgcctccatgtctccaacatcccattccgcttcagagaccca
gacttacgtcagatgttcgggcaatttggaaaaatccttgatgtagaaatcatcttcaat
gagcgggggtcaaagggctttggatttgtcacttttgagagcgctgctgaggccgataga
gcaagagaaaagctgaatgggacaattgtagaggggagaaagattgaggttaataatgcc
actgcaagagtagttacaaagaaacctcagacgcctctcgttaatggtgacatttcagca
gcttctgggtggaagattaaccctgtcatgggggcaatgtttgcacctgaactctataca
gtcgccagctttccctaccctgtagcgactcccaccctggcctaccggggctctgcgctg
cgtggccgaggtcgggctgtctacaacaccattcgctctgctgccacacccactgctatg
cccgcctaccctggggttgtatatcaggatggactgtatggaacagaagtctatggtggc
taccctgcagcagcttacagagtggctcaatcagcatctgcagccacagcaacctacagt
gacgggtacggacgagtctacgccacagctgcagatccctatcaccactcagttggacca
acaacgacatatggagttggtacaatggccagtttgtacagaggaggatacaaccgcttc
accccgtactga
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