Cololabis saira (Pacific saury): 133443628
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Entry
133443628 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133443628
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133443628
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_10
zf-RING_5
Trypan_PARP
zf-RING_6
Prok-RING_4
LMBR1
zf-RING_11
MRP-S31
DUF6504
Golgin_A5
BshC
Motif
Other DBs
NCBI-GeneID:
133443628
NCBI-ProteinID:
XP_061576693
LinkDB
All DBs
Position
5:824726..835442
Genome browser
AA seq
566 aa
AA seq
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MAQQENQLDPVKFSCSICLDLLKDPVTIPCGHSYCMKCIKDFWDEGEKKLPSCPQCRRTF
IPKPELLKNTMLADLMEELKKTGLQAAPADHCYAGPEDVACDVCSGRKLKAVKSCLFCLA
SYCQKHLQPHRDSSTFKTHQLVDPSKNLQDNICPRHGEVRKMFCRTDQKCICYLCSVDEH
KGHDTVSAAAERTERQREMEVRRQQIQQQIQDREKDVKLLKQEVEAIDQSADKTVEDSEE
MFTELISLLQKRSSEVKQQVRSQQETEVRRVRELEEKLQQEISDLKRRDAEMKQLSDTED
HNQFLHSYPSLPPLSQSTHSSGISIRPLRYFQDVAAAVSEVRGRLQDILRDTWTNVSLAV
ADVDVLLSRPEPEPEPEPEPEPTSRAGFLKYSCEITLDPNTVNTDLLLSEQNRKVTWMDQ
RQSYSDHPDRFSKYPQVLSRESLTGRHYWEVETTAAGGVYVAVSYKNISRSERESAFGYN
DKSWSLVRSIFGSYDFRYNSILTSVSGPRSSRIGVYLDHRAGVLSFYSVSGTMTLLHRVQ
TSFTQPLHAGVWIYGSGNSAEFCKLK
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaggaaaaccagctcgacccggttaaattctcttgttccatctgtttggat
cttttaaaggatccggtgactattccctgtggacacagttactgtatgaagtgcattaag
gacttctgggatgaaggagagaagaaactccccagctgtcctcagtgtcgacgcacgttt
attccgaagcctgagctgctgaaaaacaccatgttagctgatttaatggaggaactgaag
aagacgggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgctctgggaggaaactgaaagctgtcaagtcctgtttgttctgtctggcc
tcttactgccagaaacacctccaacctcaccgcgattcatctacattcaagacacaccag
ctggtggatccctccaagaacctgcaggacaacatctgcccccgtcacggggaggtgagg
aagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaacat
aaaggccacgacacggtctcggctgcagcagaaaggacggagaggcagagagagatggag
gtgagacgacaacaaatccagcagcagatccaggacagagagaaagatgtgaagctgctt
aagcaggaggtggaggccatcgatcagtctgctgataaaacagtggaggacagtgaggag
atgttcactgagctgatctctctcctccagaagagaagctctgaggtgaagcagcaggtc
agatcccagcaggaaactgaagtgaggagagtcagagagctggaggagaagctgcagcag
gagatcagtgacctgaagaggagagacgctgagatgaagcagctctcagacaccgaggac
cacaaccagttcctccacagctacccctcactgccaccactcagtcagtccacacactcc
tccggcatcagcatccgtcctctcaggtactttcaggacgtggcagcagccgtgtcagag
gtcagaggtcgactacaggacatcctgagagacacgtggacaaacgtctcactggccgtc
gctgacgtggatgttttactgtcacgaccagaaccagaaccagaaccagaaccagaacca
gaaccaacgagcagagctggattcctgaagtattcatgtgaaatcactctggatccaaac
acagtaaacacagatctgttactgtcagagcagaacagaaaggtgacttggatggaccaa
cgtcagtcttattctgatcatccagacagattcagtaaatatcctcaggttctgagtaga
gagagtctgactggacgtcattactgggaggtggagacgacagcagcaggtggagtttat
gtagcagtttcatacaagaatatcagcagatcagagagggaaagtgcatttggatataat
gataaatcttggtcactagtacgttctatctttggcagttatgacttcaggtacaacagc
atcctaacctccgtctcaggtcctcggagctccagaataggagtttacctggatcacaga
gcaggagttctgtccttctacagcgtctctggaaccatgaccctcctccacagagtccag
acctccttcactcagccgctccacgctggagtctggatttacggttctggaaactcagct
gagttctgtaaactcaaataa
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