Cololabis saira (Pacific saury): 133443635
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Entry
133443635 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133443635
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133443635
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_10
U-box
zf-RING_5
zf-RING_6
Prok-RING_4
LMBR1
MRP-S31
Exonuc_VII_L
zf-RING_4
BshC
Motif
Other DBs
NCBI-GeneID:
133443635
NCBI-ProteinID:
XP_061576703
LinkDB
All DBs
Position
5:complement(922598..934995)
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AA seq
554 aa
AA seq
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MAQQENQLDPVKFSCSICLDLLKDPVTIPCGHSYCMKCIKDFWDEGEKKLPSCPQCRRTF
IPKPELLKNTMLADLLEELKKTGLQAAPADHCYAGPEDVACDVCSGRKLKAVKSCLVCLA
SYCQKHLQPHRDAAPLKKHQLVDPSKNLQDNICPRHGEVRKMFCRTDQKCICYLCSVEEH
KGHDTVSAAAERTERQREMEVSRQQIQQQIQDREKDVKLLQQEVEAIDQSADETVEDSEE
MFTELISLLQKRSSEVKQQIRSQQETEVRRVRELEEKLQQEIRDLKRRDAEMKQLRDTED
HNQFLHSCPSLPPLSQSTHSSGISIRPLRYFQDVAAAVSEVRGRLQDILRDTWTDVSLAV
AEVDVLLPKDPTSRAGFLKYSCEITLDPNTVNTRLLLSEENRKVTHMNQRQSYSGHPDRF
SKYHQVLSRESLTGRHYWEMETTAGGVYVAVSYKNISRSGGESKFGFNDKSWSLVRCSSD
SYGFRYNSIQTSVSGPGSSRIGVYLDHRAGVLSFYSVSGTMTLLHRVQTSFTRPLHAGVW
VYYPGSSAEFCKLK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaggaaaaccagctcgacccagttaaattctcttgttccatctgtttggat
cttttaaaggatccggtgactattccctgtggacacagttactgtatgaagtgcattaag
gacttctgggatgaaggagagaagaaactccccagctgtcctcagtgtcgacgcacgttt
attccgaagcctgagctgctgaaaaacaccatgttagctgatttactggaggaactgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagacgtggcc
tgtgatgtctgctctgggagaaaactgaaagctgtcaagtcctgtttggtctgtctggcc
tcttactgccagaaacaccttcaacctcaccgtgatgcagctccactaaagaaacaccag
ctggtggatccctccaagaacctgcaggacaacatctgcccccgtcacggtgaggtgagg
aagatgttctgtcgtaccgatcagaagtgtatctgttatctctgctctgtggaggaacat
aaaggccacgacacggtctcggctgcagcagaaaggacggagaggcagagagagatggag
gtgagtcgacaacaaatccagcagcagatccaggacagagagaaagatgtgaagctgctt
cagcaggaggtggaggccatcgatcagtctgctgatgaaaccgtggaggacagtgaggag
atgttcaccgagctgatctctctcctccagaagagaagctctgaggtgaagcagcagatc
agatcccagcaggaaactgaagtgaggagagtcagagagctggaggagaagctgcagcag
gagatcagggacctgaagaggagagacgctgagatgaagcagctcagagacactgaggac
cacaaccagttcctccacagctgcccctcactgccaccactcagtcagtccacacactcc
tccggcatcagcatccgtcctctcaggtactttcaggacgtggcagcagctgtgtcagag
gtcagaggtcgactacaggacatcctgagagacacgtggacagacgtctcactggccgtc
gctgaggtggatgttttactgcccaaagacccaacgagcagagctggattcttgaagtat
tcatgtgaaatcactctggatccaaacacagtaaacacacggctgttactgtcagaggag
aacagaaaggtgactcacatgaaccaacgtcagtcttattctggtcatccagacagattc
agtaaatatcatcaggtcctgagtagagagagtctgactggacgtcattactgggagatg
gagacgacagcaggtggagtttatgtagcagtttcatacaagaatatcagcagatcaggg
ggggaaagtaaatttggatttaatgataaatcttggtcactagtacgttgttcctcagac
agttatggattcaggtacaacagcatccaaacctccgtctcaggtcccgggagctccaga
ataggagtttacctggatcacagagcaggagttctgtccttctacagcgtctctggaacc
atgaccctcctccacagagtccagacctccttcactcggccgctccacgctggagtctgg
gtttactatcctggatcctcagctgagttctgtaaactcaaataa
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