Cololabis saira (Pacific saury): 133443664
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Entry
133443664 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133443664
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133443664
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
Trypan_PARP
U-box
zf-RING_5
zf-RING_10
zf-RING_6
Prok-RING_4
LMBR1
BshC
Exonuc_VII_L
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
133443664
NCBI-ProteinID:
XP_061576775
LinkDB
All DBs
Position
5:complement(2185471..2191291)
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AA seq
584 aa
AA seq
DB search
MAQQENPLDPVKFSCSICLDLLKDPVTIPCGHSYCMKCIKDFWDEGEKKLPSCPQCRRTF
IPKPELLKNTMLADSLEELKKTGLQAAPADHCYAGPEDVACDVCSGRKLKAVKSCLICLA
SYCQKHLQPHRDAAPLKKHQLVDLCKNLQDNICPRHGEVRKMFCRTDQKCICYLCSVDEH
KGHDTVSAAAERTERQREMELSREHIQQQIQDREKDVKLLQQEVEAIDQSADKTVEDSEE
MITELISLLQKRSSEVKQQIRSQQETEVRRVRELEEKLQQEITDLKRRDAEMKQLSETGD
HNQFLHSCPSLSPLSQSTHSSGINIRPLRYFQDVAAAVSEVRGRLQDILRDTWTNVSLAV
ADVDVLLLRPEPEPGPEPGPEPGPEPEPGPEPEPEPEPEPTSRAGFLKYSCEITLDPNTV
NRDLLLSEQNREVTVMDQPQSYSDHPDRFSDDYYRQVLSRESLTGRHYWEVETAGGVYVA
VSYKNISRSGWESAFGWNDKSWSLECYSGSYVFWYNSINTSVSGPASSRIGVYLDHRAGV
LSFYSVSGTTTLLHRVQTSFTRPLHAGVGINSGSGKSAEFCKLK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaggaaaacccgctcgacccagttaaattctcttgttccatctgtttggat
cttttaaaggatccggtgactattccctgtggacacagttactgtatgaagtgtattaag
gacttctgggatgaaggagagaagaaactccccagctgtcctcagtgtcgacgcacgttt
attccgaagcctgagctgctgaaaaacaccatgttagctgattcattggaggaactgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgctctgggagaaaactgaaagctgtcaagtcctgtttgatctgtctggcc
tcttactgccagaaacacctccaacctcaccgtgatgcggctccactaaagaaacaccag
ctggtggatctctgtaagaacctgcaggacaacatctgcccccgtcacggtgaggtgagg
aagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaacat
aaaggccacgacacagtctcagctgcagcagaaaggacggagaggcagagagagatggag
ctgagtcgagaacacatccagcagcagatccaggacagagagaaagatgtgaagctgctt
cagcaggaggtggaggccatcgatcagtctgctgataaaacagtggaggacagtgaggag
atgatcactgagctgatctctctcctccagaagagaagctctgaggtgaagcagcagatc
agatcccagcaggaaactgaagtgaggagagtcagagagctggaggagaagctgcagcag
gagatcactgacctgaagaggagagacgctgagatgaagcagctctccgaaactggggac
cacaaccagttcctccacagctgcccctcactgtcaccactcagtcagtccacacactcc
tccggcatcaacatccgtcctctcaggtactttcaggacgtggcagcagccgtgtcagag
gtcagaggtcgactacaggacatcctgagagacacgtggacaaacgtctcactggccgtc
gctgacgtggatgttttactgttacgaccagaaccagaaccaggaccagaaccaggacca
gaaccaggaccagaaccagaaccaggaccagaaccagaaccagaaccagaaccagaacca
acgagcagagctggattcttgaaatattcatgtgaaatcactctggatccaaacacagta
aacagagatctgttactgtcagagcagaacagagaggtgacagttatggaccaacctcag
tcttattctgatcatccagacagattcagtgatgattattatcgtcaggttctgagtaga
gagagtctgactggacgtcattactgggaggtggagacagcaggtggagtttatgtagca
gtttcatacaagaatatcagcagatcagggtgggaaagtgcatttggatggaatgataaa
tcttggtctctagagtgttactcaggcagttatgtgttctggtacaacagcatcaacacc
tccgtctcaggtcctgcttcctccagaataggagtttacctggatcacagagcaggagtt
ctgtccttctacagcgtctctggaaccacgaccctcctccacagagtccagacctccttc
actcggccgctccacgctggagtcgggattaactccggttctggaaaatcagctgagttc
tgtaaactcaaataa
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