Cololabis saira (Pacific saury): 133443665
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Entry
133443665 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133443665
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133443665
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
SPRY
zf-RING_5
U-box
zf-RING_6
Prok-RING_4
FapA
LMBR1
MRP-S31
BshC
Motif
Other DBs
NCBI-GeneID:
133443665
NCBI-ProteinID:
XP_061576776
LinkDB
All DBs
Position
5:2803813..2807142
Genome browser
AA seq
547 aa
AA seq
DB search
MAQQENQLDPVKFSCSICLDLLKDPVTIPCGHSYCLKCIKDFWDEGEKKLPSCPQCRRTF
IPKPELLKNTMLADLMEELKKTGLQAAPADHCYAGPEDVACDVCSGRKLKAVKSCLVCLA
SYCQKHLQPHRDSSTFKKHQLVDPCKNLQDNICPRHGEVMKMFCRTDQKCICYLCSVDEH
KGHNTVSVAAERTERQREMEVRRQQIQQQIQDREKDVKLLQQEVEAIDQSADKTVEDSEE
MFTELISLLQKRSSEVKQQIRSQQETEVRRVRELEEKLQQEITDLKRRDAEMKQLRDTKD
HSHSSSISIRPLRYFQDVAAAVSEVRDRLQDILRDTWTNVSLAVADVDVLLSQPGPEPEP
EPEPTSRAGFLKYSCEITLDPNTVNTDLLLSEQNRKVTRMNQRHSYSDHPDRFTGYYLQV
LSRESLTGRHYWEVETAGLNDVAVSYKNISRSGGETAFGFNDKSWSLYCSSDSYVFMYNR
IQTSVSGPRISRIGVYLDHRAGVLSFYSVSGTMTLLHRVQTSFIRPLHAGVRINEFFGGS
AEFCKLK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaggaaaaccagctcgacccagttaaattctcttgttccatctgtttggat
cttttaaaggatccggtgactattccctgtggacacagttactgtctgaagtgtattaag
gacttctgggatgaaggagagaagaaactccccagctgtcctcagtgtcgacgcacattt
attccgaagcctgagctgctgaaaaacaccatgttagctgatttaatggaggaactgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgctctggaaggaaactgaaagctgtcaagtcctgtttggtctgtctggcc
tcttactgccagaaacacctccaacctcaccgtgattcatctacattcaagaaacaccag
ctggtggatccctgtaagaacctgcaggacaacatctgcccccgtcatggtgaggtgatg
aagatgttctgtcgtactgatcagaagtgtatctgctatctctgctctgttgatgaacat
aaaggccacaacacagtctcagttgcagcagaaaggactgagaggcagagagagatggag
gtgagacggcaacagatccagcagcagatccaggacagagagaaagatgtgaagctgctt
cagcaggaggtggaggccatcgatcagtctgctgataaaacagtggaggacagtgaggag
atgttcactgagctgatctctctcctccagaaaagaagctctgaggtgaagcagcagatc
agatcccagcaggaaactgaagtgaggagagtcagagagctggaggagaagctgcagcag
gaaatcactgacctgaagaggagagacgctgagatgaagcagctcagagacaccaaggac
cactcacactcctccagcatcagcatccgtcctctcaggtactttcaggacgtggcagca
gccgtgtcagaggtcagagatcgactacaggacatcctgagagacacgtggacaaacgtc
tcactggccgtcgctgacgtggatgttttactgtcacaaccaggaccagaaccagaacca
gaaccagaaccaacgagcagagctggattcttgaaatattcatgtgaaatcactctggat
ccaaacacagtaaacacagatctgttactgtcagagcagaacagaaaggtgactcggatg
aaccaacgtcattcttattctgatcatccagacagattcactggttattatcttcaggtt
ctgagtagagagagtctgactggacgtcattactgggaggtggagacagcaggtttaaat
gatgtagcagtttcatacaagaatatcagcagatcagggggggaaactgcatttggattt
aatgataaatcttggtcactatattgttcctcagacagttatgtattcatgtacaacaga
atccaaacctccgtctcaggtcctcggatctccagaataggagtttacctggatcacaga
gcaggagttctgtccttctacagcgtctctggaaccatgaccctcctccacagagtccag
acctccttcattcggccgctccacgctggagtcaggattaacgagttttttggaggatca
gctgagttctgtaaactcaaataa
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