Cololabis saira (Pacific saury): 133444505 Help Entry 133444505         CDS       T09849                                  Symbol sf3b3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism csai  Cololabis saira (Pacific saury) Pathway csai03040   Spliceosome Brite KEGG Orthology (KO) [BR:csai00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     133444505 (sf3b3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:csai03021]     133444505 (sf3b3)    03041 Spliceosome [BR:csai03041]     133444505 (sf3b3)    03036 Chromosome and associated proteins [BR:csai03036]     133444505 (sf3b3) Transcription machinery [BR:csai03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      133444505 (sf3b3) Spliceosome [BR:csai03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     133444505 (sf3b3)  Complex B     133444505 (sf3b3)  Complex C    U2 SnRNP specific factors     133444505 (sf3b3) Chromosome and associated proteins [BR:csai03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      133444505 (sf3b3)     TFTC complex      133444505 (sf3b3) BRITE hierarchy Motif Pfam:  MMS1_N CPSF_A Motif Other DBs NCBI-GeneID:  133444505 NCBI-ProteinID:  XP_061578325 LinkDB All DBs Position 5:complement(50573292..50645830) Genome browser AA seq 1217 aa AA seqDB search MFLYNLTLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQY LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATGMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT PQLYVSCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGIEKQDELGDKTTM GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPETNNLVLIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPEAIFGAPKAGAGQWASLVRLVNPIQGATLDQVQLEQNEAAFSVAVCRFPNTG DEWYVLVGVARDMILNPRSVGGGFIYTYRLTAGGEKLEFVHKTPVEDVPLAIAPFQGRVL VGVGKLLRIYDLGKKKLLRKCENKHVPTIVTGIHTIGQRVIVTDVQESLFWVRYRRNENQ LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG LLNGASQKAEVIVNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVSEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctgtacaacctgaccctgcagagggccaccggcatcacccacgccatccatgga aacttctcaggaaccaagatgcaggagattgttgtttccagaggaaagatcttagaatta ttgcgtccggatgccaacacaggaaaagtgcacactcttctcacagtggaagtgtttggc attgtgagatccctgatggctttcagactcacaggaggaaccaaagattacattgttgtt ggaagtgacagtggccgcattgtcatcctggagtatcatccatccaaaaacatgtttgag aagatccaccaggaaacatttgggaagagcggctgccggagaattgtccctggacaatac ctggctgtggaccctaaaggcagagctgttatgatcggagcgatagagaaacagaaactg gtgtatattctgaacagagacgccgctgcacggctgaccatctcctctccactggaagct cataaagcaaacacgctggtctatcacgtcgtcggagtggacgttggctttgaaaacccc atgttcgcctgtctagaaatggactacgaggaagctgacaacgacccgacgggagaagct gctgcaaacacgcagcaaacactcaccttttatgaactggatctgggcttgaatcacgtg gtacgaaagtacagtgaagctttggaagagcatggcaatttcctcatcactgttcctggt ggttccgacgggcccagcggggttctcatctgctctgaaaactacatcacttacaagaac tttggagaccagcctgacatccgctgtccaatccctcgccgcaggaatgacctggacgac ccggagcggggcatgatatttgtctgctcggccacccacaagaccaagtctatgttcttc ttcctggctcagacagagcagggcgacatctttaaagtcaccctggaaacggacgaagaa atggtcacagaaatcagactgaagtattttgacactatccccgtggcaacaggcatgtgt gttctcaaaaccggcttcctgtttgtggcctcagagtttggaaaccattatctttatcaa attgctcacttgggtgacgatgacgatgagcccgagttctcctctgccatgccgttagaa gaaggagacacgttcttcttccagccccggccgctcaaaaacctagtgctggtggacgaa caagagaacctgtcccccatcatgtcctgccagattgcagatttggcaaacgaagacacg cctcagctgtacgtttcctgcggacgaggacccaggtcgactctgcgagttctccgacac ggactggaggtttcggagatggccgtgtctgagctgcctggtaaccccaacgctgtgtgg acggtccgcagacacgtggaagatgagtttgacgcgtacatcatcgtgtccttcgtcaac gctacgctggttctgtccatcggggagacggtagaggaagtgacagattcagggtttctg ggaacgacgcccacgctgtcctgctctctgctgggggaggacgccctcgtccaggtgtac cccgacggtatccgccacatccgagcagacaagcgtgtgaacgagtggaagactccgggt aaaaaaaccatcgtccgctgcgccgtgaaccagcggcaggtggtcatcgctctgaccgga ggggagctggtctactttgagatggacccgtctggccagctgaacgagtacacggagcgg aaggagatgtctgcagacgtggtgtgcatgagcctggcaaacgtcccgcccggcgagcag cgctcccgcttcctggctgtgggactggtggacaacacggtccggatcatctccctggac ccctcggactgtctgcagccgttgagtatgcaggctcttcctgcccagccagagagtctg tgcatcgtagagatgggcggcatcgagaagcaggatgaacttggagacaaaaccaccatg ggtttcctctacctgaacatcggcctccagaacggtgtgctgcttaggacggttctggac cccgtgaccggggacttgtcagataccagaacccgctacctgggctcccgacccgtcaag ctgttcagagtccggatgcagggccaggaagctgtattggccatgtccagccgctcgtgg ctcagctactcgtaccagtcccggttccacctgaccccgctctcgtacgagactctggaa tacgcctcgggcttcgcctccgagcagtgtcccgagggcatcgtggccatctccaccaac acgctcagaatcctggctctggagaaactaggagcggttttcaaccaggtggcctttcct ctgcagtacacgcccaggaagtttgtaatccacccagaaaccaacaacctggtcctgatt gagacggaccacaacgcctacacagaagcaaccaaggctcagaggaagcagcagatggct gaggaaatggtggaggctgctggcgaggacgagcgagagctggctgctgaaatggctgct gcgttcctcaacgagaatctccccgaagccatttttggagcgcctaaagccggagccggg cagtgggcgtcgctggtgcggctggttaatcccatacagggagcaacgctagaccaggtg cagctggagcagaacgaagctgcattcagtgttgcagtgtgtcggtttcccaacacgggg gacgaatggtacgtcctggtgggcgtagccagagacatgatcctcaacccccggtcggtg gggggcgggttcatctacacctatcggctcactgctggaggggagaagctcgagtttgtg cataagactccagtagaggatgtaccgttggctatcgcaccgttccagggacgagtcctg gtcggagttgggaaacttctgagaatctacgacttgggcaagaagaagctgcttcgcaag tgtgagaacaagcacgtccccaccattgtgactggtatccacaccattggccagcgggta attgtgacagacgttcaggagagtctgttttgggttcggtatcgacgcaacgagaaccag ctcatcatctttgccgatgacacgtatccccgctgggtgacgacggcctgcctgctggac tacgacaccatggcctctgccgataagtttggaaacatcagcatcgtgcgtctcccgccc aacaccagcgacgacgtggacgaagaccccacggggaacaaagccttatgggacagaggg ctcctgaacggagcatcacaaaaggctgaagtgatagtcaactaccacgtaggggagacc gtgttgtctctccagaaaaccactctgatccccggaggctccgagtccctggtctacacc acgctgtccggaggcatcggcatcctggtccccttcacttcccatgaggatcatgacttc ttccagcatctagagatgcacatgcgctctgaattccccccgctctgcgggagagaccac ctgagcttcaggtcctactacttcccagtgaagaatgtgattgatggagatctttgcgag cagttcaacagcatggatccccacaagcagaaaagtgtctctgaggagctggacaggacg cccccagaggtgtccaagaagctggaggacatccgcactcgctacgccttctaa

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