Cololabis saira (Pacific saury): 133444814
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Entry
133444814 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133444814
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133444814
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
U-box
zf-RING_5
zf-RING_6
Prok-RING_4
MRP-S31
LMBR1
Trypan_PARP
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
133444814
NCBI-ProteinID:
XP_061578698
LinkDB
All DBs
Position
5:complement(45922946..45925368)
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AA seq
565 aa
AA seq
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MAQEGDQLDQETFSCSICLEFLKDPVAIPCGHSYCMNCIKSYWDEGEKKLPSCPQCRETF
TTRPALVKNTMLAALVEQLKKIGLQAAPADHCYAGPGDVACDVCSGRKLKATKSCLVCLV
SYCEKHLQPHHEVAQLKKHKLADPSMNLQDNICPRHDEVRKMFCRTDQKCICYLCSVDEH
KGHDTVSAAAERNERQREMEVSRQQIQQEIQDREKDVKLLQQEVEAINQSADKTVEDSEE
IFTELISLLQKRSSEVKQQIRSQQETEVRRVRELEEKLQQEITDLKRRDAEMKQLRDIED
HNQFLHSFSSLPPLSESTHSSSISIRPLRYFQDVTAAMSEVRGQLQDILRDTWTNISLTV
AEVDVLLPQPEPEPESEPEPTSRAGFLKYSCEITLDPNTVNTRLLLSEGNRKVTFMNQHQ
SYSDHPDRFTNLYQVLSRESLTGRHYWEVEKKAGVIRVAVSYKNISKSGRWKESGFGGNE
ESWSLRFSSDSYEFYHNSIRTSISGPQSSRIGVYLDHRAGVLSFYSVSETMTLLHRVQTS
FTQPLHAGVRVNNRPGESAEFCKLK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggaaggagatcagctggaccaggaaaccttttcttgttccatctgtttggag
tttttaaaggatccggtggctattccctgtggacacagttactgtatgaactgtattaaa
tcctactgggatgaaggagagaagaaactccccagctgtcctcagtgtagagagactttc
accacgaggcctgcgctggtgaaaaacaccatgttagcagctttagtggagcagctgaag
aagattggactccaagctgctcctgctgatcactgctatgctggacctggagatgtggcc
tgtgatgtctgctctgggagaaaactgaaagccaccaagtcctgtttggtctgtctggtc
tcttactgcgagaaacaccttcaacctcatcatgaagtggctcaattaaagaaacacaag
ctggcggatccctccatgaacctgcaggacaacatctgcccccgtcatgatgaggtgagg
aagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaacat
aaaggccacgacacagtctcagctgcagcagaaaggaatgagaggcagagagagatggag
gtgagtcgacaacaaatccagcaggagatccaggacagagagaaagatgtgaagctgctt
cagcaggaggtggaggccatcaatcagtctgctgataaaacagtggaggacagtgaggag
atcttcactgagctgatctctctcctccagaagagaagctctgaggtgaagcagcagatc
agatcccagcaggaaactgaagtgaggagagtcagagagctggaggagaagctgcagcag
gaaatcactgacctgaagaggagagacgctgagatgaagcagctcagagacatcgaggac
cacaaccagttcctccacagcttctcctcactgccaccactcagtgagtccacacactcc
tccagcatcagcatccgtcctctcaggtactttcaggatgtgacagcagctatgtcagag
gtcagaggtcaactacaggacatcctgagagacacgtggacaaacatctcactgaccgtc
gctgaggtggatgttttactgccacaaccagaaccagagccagaatcagaaccagaacca
acgagcagagctggattcttgaagtattcatgtgaaatcactctggatccaaacacagta
aacacacggctgttactgtcagaggggaacagaaaggtgacttttatgaaccaacatcag
tcttattctgatcatccagacagattcactaatctttatcaggtcctgagtagagagagt
ctgactggacgtcattactgggaggtggagaagaaagcaggtgtaattcgtgtagcagtt
tcatacaagaatatcagcaaatcagggcggtggaaggaaagtggatttggaggaaatgag
gaatcttggtcactacgtttttcctcagacagttatgaattttatcacaacagcatcaga
acctccatctcaggtcctcagagctccagaataggagtttacctggatcacagagcagga
gttctgtccttctacagcgtctctgaaaccatgaccctcctccacagagtccagacctcc
ttcactcagccgctccacgctggagttcgggttaataaccgtcctggagaatcagctgag
ttctgtaaactcaagtag
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