Cololabis saira (Pacific saury): 133446237
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Entry
133446237 CDS
T09849
Name
(RefSeq) regulator of nonsense transcripts 3A-like
KO
K14328
regulator of nonsense transcripts 3
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
csai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133446237
03015 mRNA surveillance pathway
133446237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133446237
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
133446237
mRNA cycle factors
P-body specific factors
133446237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
133446237
NCBI-ProteinID:
XP_061580203
LinkDB
All DBs
Position
6:48568747..48585941
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AA seq
475 aa
AA seq
DB search
MRSEKDQVPANRDKGGVEIQFRDLPRDQDLLHPGGLKPKEDKKEVFTKVVIRRLPPTLSR
DQLEEQLSPLPSYDYFEFFPADQSLYPHLFSRAYINFRNPEEILLFRDRFDGYVFIDNRG
QEFPAVVEFAPFQKISKKKLKKKDAKAGSIEEDPEYRRFLEFYSCDEEKSMANPETLLGE
IEARTKELIARRTTPLLEYIKNKKIEKQRIREEKREERRRRELEKKRQREEEKRKRREEE
RRKRKEAEKQKKLSDKDIKIKLLKKSDREDDADPDRPKDKSDAGETDRGKWDKTGGQTGG
QTGGQTKVKEQKEKAPADGDKDPPGRRPRDSKDHRGKDEDRKRQQHHYDFDKFMRRKDET
KWGKNYCQDRMDRPRKEGHQGHQGHQGHHHGFYCPDGGDKTGREDRDDPGRKEQRLRNKD
RPAMQLYQPGSRNRKRMSPAGKGYDCVAVSRSPEHRTETEGVSTATGPEKDKEED
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgagaaggaccaggttcccgcgaacagggacaaggggggggtggagatccag
ttccgggacctcccgcgggaccaggacctgctgcacccggggggcctgaagcccaaggag
gacaagaaggaggttttcaccaaggtggtgatccggcgtctccctccgactctctccagg
gatcagctggaggagcagctcagtcctcttccttcctacgactactttgagttcttccct
gcagatcagagcctgtatcctcacctgttctccagagcttacatcaacttcaggaacccg
gaggaaatcctgctgttcagggaccggttcgacggctacgtcttcatcgacaaccgaggc
caggagtttcccgccgtggtggaattcgctcctttccagaagatttccaagaagaagctg
aagaagaaagatgccaaagctggaagcatcgaagaagatccggagtaccggaggttcctg
gagttttattcctgcgatgaggaaaagtcgatggcgaatccagagacgctgctgggggag
atcgaggcccggaccaaggagctcatagcgcggcgcaccacccccctgctggaatacatc
aagaacaagaagattgagaagcagaggatccgggaggagaagagggaggagaggaggcga
cgggagctggagaagaagcgccagcgcgaggaggagaagaggaagagacgggaggaggag
cgacgcaagaggaaggaggcggagaagcagaagaagctgtcggacaaagacatcaagatc
aagctgctgaagaaaagcgacagggaggacgatgctgatccggaccggcccaaggacaag
agcgacgccggggagacggaccggggcaagtgggacaagacgggaggacagacgggagga
cagacgggaggacagacgaaggtgaaggagcaaaaagaaaaagctccggccgacggggac
aaggatcctcccggccgccggccgcgagacagcaaggaccaccgggggaaggacgaggac
cggaagcggcagcagcaccactacgacttcgacaagttcatgaggaggaaggacgagacc
aagtgggggaagaactactgccaggaccggatggaccggcccaggaaggaggggcaccag
gggcaccaggggcaccaggggcatcaccacggcttctactgccccgacgggggcgacaag
acgggcagggaggaccgggacgacccggggaggaaggagcagcggctccggaacaaggac
cgacccgccatgcagctctaccagcccgggtcccgcaacaggaagcgcatgagcccggcc
gggaaaggctacgactgcgtcgccgtgagccgctcgcccgaacacaggacggagacggag
ggtgtctccacggcaacggggccggagaaggacaaggaggaggactga
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