Cololabis saira (Pacific saury): 133446257
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Entry
133446257 CDS
T09849
Symbol
shox
Name
(RefSeq) short stature homeobox protein isoform X1
KO
K09331
short stature homeobox protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133446257 (shox)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
133446257 (shox)
BRITE hierarchy
Motif
Pfam:
Homeodomain
Homeobox_KN
OAR
MRP-L20
Motif
Other DBs
NCBI-GeneID:
133446257
NCBI-ProteinID:
XP_061580241
LinkDB
All DBs
Position
6:50242588..50260531
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AA seq
307 aa
AA seq
DB search
MEELTAFVSKSFDQKSKESNKESITYREVLESGLTRARELGSPDSNLQDITDPAHCAVHM
FKEHELDKDKLKDFNVSRSTDGIYELKEKKEEVKSEDEDPQGKLKQRRSRTNFTLEQLNE
LERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKDIFPFSPGVI
LGSGSHLDACRVAPYVNMGALRMPFQQVQAQLQLDGVAHSHPHLHPHLAAHAPYLMFPPP
PFGLPIASLADSASAAAAVAAAAKSNSKNSSIADLRLKAGLLRGQWLSPLQAQITSQGPY
KHMWMSV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttacggcattcgtgtcgaaatccttcgaccagaagagcaaggagagcaac
aaagaaagcatcacgtaccgggaagttttggagagcgggctgacgcgcgcccgcgagctg
ggcagcccggactcgaacctgcaggacataacggacccggcccactgcgccgtgcacatg
ttcaaggagcacgagctggacaaggacaagctcaaggactttaatgtttccaggtcgacg
gacgggatctacgagctgaaggagaagaaggaggaggtgaagtcggaggacgaggacccg
caggggaagctgaagcagcgccgcagcagaaccaacttcacgctggagcagctgaacgag
ctggagcggcttttcgacgagacgcactacccggacgcgttcatgcgggaggagctgagc
cagcggctggggctgtccgaggcccgggtccaggtttggtttcagaacagaagagcgaaa
tgtcgaaaacaagaaaaccagatgcacaaagacatctttcccttctccccaggtgtgatc
ctgggcagcggctctcacctggacgcctgccgcgtggcgccgtacgtcaacatgggcgcg
ctgcggatgcccttccagcaggtccaggctcagctgcagctggacggcgtcgcccactcc
cacccccacctgcacccccacctggccgcccacgccccctacctgatgttcccgccccct
cccttcggactaccaatcgcgtcgctcgccgactccgcctccgcggcggcggcggtggcg
gcggccgccaaaagcaacagcaagaactcgagcatcgccgacctgcgactcaaggcagga
cttctgcggggccagtggctcagtccactccaggcacagatcacatcccagggaccgtac
aaacacatgtggatgtctgtgtga
DBGET
integrated database retrieval system
