Cololabis saira (Pacific saury): 133448947
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Entry
133448947 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133448947
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133448947
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
U-box
LRIM1_dimer
zf-RING_2
zf-RING_6
PaRep2a
Motif
Other DBs
NCBI-GeneID:
133448947
NCBI-ProteinID:
XP_061583956
LinkDB
All DBs
Position
8:38324634..38327053
Genome browser
AA seq
555 aa
AA seq
DB search
MAQQGNQLDSVKFCCSICLDLLKDPVTIPCGHNYCMNCIKTCWDGKSHIGVHSCPQCRET
FTLRPVLVRNSMLAELVEEMKKTGLQAAPADLCYAGPEDVTCDVCTGRQVKAVKSCLVCL
VSYCEKHLQPHYDAPAFKKHQLVDPSKKLQENICSLHHEVMKIFCRTDQQSICYLCTMDE
HKGHETVSATAERREKQKELEVSRQQIQQRIQDREKDVELLQQEVKNINVSADKSVENSE
KSFNVVIRLLQKRSSDMKQQVRSQQEQEVSRVKDLQEKQQEITDLKRREAELEKLCHTED
HNQFLHNYPSPSPLSGSTHSSSIQIRPLRYFEDVTAAVSETTDKLQDLLRESWTNISLSV
AEVDVLLSEPEPKTRDGFLKYSRDITLDPNTAHEQLLLSNGNRKVTVMKENQSYSSHPDR
FNYWFQVLSKQSLTGRCYWEVEWRGRAVCVAVAYKNISRKGNSNDSGFGHNNKCWTLRCD
TDIYTFWYNNIKTRVSGPPSSRVGVFLDHRAGLLSFYSVSETMTLLHTVQTTFTQPLHAG
LWVDGSSSAQFVNVK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaacaaggaaaccagcttgactctgtgaagttctgttgttccatctgtctggat
ctactgaaggatccggtgacgattccctgtggacacaactactgcatgaactgtattaaa
acatgctgggatggaaagagtcacataggagtccacagctgtcctcagtgcagagagacc
ttcacactgagacccgtcctggtgagaaacagcatgttagcagagttagtggaggagatg
aagaagactggactccaagctgctcctgctgatctctgctatgctggacctgaagatgtg
acctgtgatgtctgcactgggaggcaggttaaagctgtcaagtcctgtctggtctgtctg
gtctcttattgtgagaaacatctccaacctcactatgatgctcctgcttttaaaaaacac
cagctggtggatccctccaagaagctccaggagaatatctgctctctccaccatgaggtg
atgaagatcttctgtcgtactgatcagcagagtatctgttatctgtgtacaatggatgaa
cataaaggtcatgaaacagtctcagctacagcggaaagacgtgagaagcagaaggagctg
gaggtgagtcgacaacaaatccagcagagaatccaggaccgagagaaagacgtggagctg
cttcagcaggaggtgaaaaacatcaatgtctctgctgataaatcagtggagaacagtgag
aagagcttcaacgtggtgatccgtctcctccagaaaagaagctctgatatgaagcagcag
gtcagatcccagcaggaacaggaagtgagtcgagtcaaagatcttcaggagaagcagcag
gagatcactgacctgaagaggagagaagctgagttggagaagctctgccacacagaggac
cacaaccagttcctccacaactacccctcaccgtcacccctcagtgggtccacacactca
tccagcatccagattcgtcctctgaggtactttgaggatgtgacagcagctgtgtcagag
accacagataaactacaggaccttctgagagagtcgtggacaaacatctcactgtcagtg
gctgaagtagatgttttactgtcggaaccagaaccaaagaccagagatggattcttgaag
tattcacgagacatcactctggatccaaacacagctcacgaacaactgttactgtctaat
gggaacagaaaagtaacagtaatgaaagaaaaccagtcatattccagtcatccagacaga
ttcaattattggtttcaggtcctgagtaagcagagtctgactggtcggtgttactgggag
gtggagtggagaggaagagcagtttgtgttgcagtcgcatacaagaacatcagcagaaaa
ggaaactcaaatgattctggatttggacacaacaacaaatgctggactttgcgttgtgac
acagacatttacacattttggtacaacaacattaaaactcgtgtttcaggtcctccttcc
tccagagttggagtgttcctggaccacagagctggtcttctgtccttctacagcgtctct
gagaccatgaccctcctccacacagtccagaccaccttcacccagccgctccacgctgga
ctttgggttgatggaagcagttcagcccagtttgttaatgttaagtaa
DBGET
integrated database retrieval system
