Cololabis saira (Pacific saury): 133449405
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Entry
133449405 CDS
T09849
Symbol
trim62.1
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM62
KO
K12030
tripartite motif-containing protein 62 [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133449405 (trim62.1)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133449405 (trim62.1)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133449405 (trim62.1)
BRITE hierarchy
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
CorA
zf-RING_6
zf-RING_10
zf-RING_5
KxDL
Phasin
AAA_13
U-box
Ribosomal_L37ae
Spc24
Snapin_Pallidin
DUF6872
DUF4795
DUF1664
PilJ
Motif
Other DBs
NCBI-GeneID:
133449405
NCBI-ProteinID:
XP_061584531
LinkDB
All DBs
Position
8:complement(24659552..24699397)
Genome browser
AA seq
475 aa
AA seq
DB search
MACCLKDELLCSICLSIYQDPVSFGCEHYFCRKCITEHWSRQEPHGVRDCPECRRTFADP
LLSPSLKLSNIVERYSAFPLDAILNAQRSSYPCKDHEKVKLFCLTDKSLVCFFCDEPALH
EQHQVTTIDEAYEEIQREMKEQLATLQDSERGHTEALQLLQRQLTETKSSAKSLRATIGD
AFERLHRFLRERQKSMLEELEMDTARKLADIEHKIQRYSQQLRDVKEGIQILQERLNESG
RHDFLEGVAVTSERIKGKIHETNLTYEDFPTSKYMGPLQYTIWKSLFQDVSPVPAALTLD
PITAHQRLILSDDCTIVAYGNLHPQPLQDSPRRFDVEVSVLGAEGLTSGVHYWEVMVSEK
TQWMIGVASETVSRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVKSKLEKVGVFL
DYPKGLLIFYNAEDMSWLYTYREKFPAKVFPYFSPGQSHANGKNVQPLRINTVRL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcttgctgtctgaaggacgagctcctctgttccatctgtcttagcatttaccaggac
cccgtcagctttggctgcgagcactacttctgcagaaagtgcatcaccgagcactggagc
agacaggagcctcacggagtgcgagactgccctgagtgccggcggaccttcgccgatcca
ctcctttcgccgagtctcaagttgtccaatattgtagagcgctattcagcctttccactg
gatgccattctgaacgctcagaggagctcatacccctgcaaggaccacgagaaggtcaag
ctcttctgcctcactgacaaaagcttggtttgcttcttctgcgacgagccagcgctgcac
gagcagcaccaagtgaccactattgacgaggcgtacgaggagatccagagggagatgaag
gagcagctggccacactgcaggatagtgagaggggacacaccgaagctctgcagctcctg
cagagacagctcactgagaccaagtcctcggcgaagagtctgcgtgcaaccatcggggat
gcatttgagcgtcttcatcgcttcctgcgagagcgccagaagagcatgctggaggagctg
gagatggatacggcccgcaagctggccgacatcgagcacaagatccagcgctacagtcag
cagctgcgtgacgtcaaggaaggcatccagatcctgcaggagcgcctcaacgagtcgggc
cgtcacgacttcctggagggtgtagccgtcacatccgagaggattaaagggaagatacat
gagaccaacctgacatacgaggacttcccaacatccaaatacatggggcccttacagtac
acaatatggaaatcactcttccaggacgtttcaccagttcccgcagcgttgacccttgac
cccatcacggcccaccaaagattgatcctctctgacgactgcaccattgtggcctacggg
aatctccacccgcagcctctgcaggattcccctcggcgctttgacgtggaggtctctgtc
ctgggagcagaaggcttaacgtcgggcgttcattactgggaggtgatggtgtcggagaag
acgcagtggatgatcggtgtggccagtgagacagtcagccgcaaaggcagcatccaaatc
caaccgagccgtggcttttactgcattgtcatgcatgacggcaaccagtacagcgcgtgc
accgagccctggacgcgcctcaacgtcaagagcaagctagagaaggtgggggtgttcctg
gactaccctaaaggcctgctcatcttctacaatgcagaagacatgtcctggctctacacc
tacagagagaaattccccgccaaggtcttcccctactttagtcccggccaaagtcacgct
aatggcaagaatgtgcagccgctacgcatcaacacggtccgtctttaa
DBGET
integrated database retrieval system
