Cololabis saira (Pacific saury): 133449581
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Entry
133449581 CDS
T09849
Symbol
cxxc1b
Name
(RefSeq) CXXC-type zinc finger protein 1b
KO
K14960
COMPASS component SPP1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133449581 (cxxc1b)
03036 Chromosome and associated proteins [BR:
csai03036
]
133449581 (cxxc1b)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
133449581 (cxxc1b)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
133449581 (cxxc1b)
COMPASS/SET1 complex (yeast)
133449581 (cxxc1b)
BRITE hierarchy
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Gal4_dimer
Motif
Other DBs
NCBI-GeneID:
133449581
NCBI-ProteinID:
XP_061584731
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All DBs
Position
8:complement(43251229..43259943)
Genome browser
AA seq
563 aa
AA seq
DB search
MDMSKSQRSRGPETSTMEGENAPLYCICRKPDINCFMIGCDNCNEWFHGHCINITEKIAK
AIQEWYCMMCREENPSLEIKYRSKKSREREFDPDERQYSTPSTPDYKSERRRGSKVKRSV
RMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRFRQCEVRARKMLRVKEEEMSLS
ERRENRRRRYSDDYDSEAELYQQYRAAGINDHMSWATDDDEEPAFSPVMRKKAIKVKHVK
RREKKFDKKKESRRHKQKQKHKDRNRHSERGDVRDTGGFRQCLGPNCVDASRPGSKYCSE
DCGMKLAANRIYEILPQRIQQWQQSPCIAEEHGKKQLERIRRDQQNARLHLTEMERRFHE
LEGIIAKAKEQAVQQDEEVNENDSEDTDLQIFCVSCSHPINPKVALRHMERCYAKYESQT
SFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKVPVDEVCGCPLVKNVF
ELTKEYCRVSKRKCNKHYNWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAMTNRAGLL
ALMLHQTIQHDPVTTDLRCSKDR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggacatgtctaaaagtcagcgctcacgtggacctgagaccagcactatggagggggag
aatgcaccactttactgcatttgccgtaaaccagacatcaactgcttcatgattggctgt
gacaactgcaatgagtggttccacggacactgcattaacatcactgagaaaatagccaag
gcaatccaggagtggtactgcatgatgtgcagagaagaaaatccatctttggaaataaaa
tatagatcaaagaagagccgggagagggaatttgatcctgatgaaagacaatacagcact
ccaagtactcccgactataaaagtgaaaggcggcgtggctctaaagtgaagcgttccgtc
cggatgtgtggggagtgtgagccctgccggaggacggaggactgtgctcagtgtgacttc
tgcaaggacatgaagaaatttggaggcccaaacaaaatcaggcagaagtgcaggttcagg
cagtgtgaggtccgagccaggaaaatgctgcgtgtaaaggaagaggaaatgtctttgagt
gaaaggagggagaacagacggaggcgctactcggacgactacgacagtgaggcagaactc
taccaacaatacagagcagcaggaatcaacgaccacatgtcgtgggctactgacgatgac
gaagagccggctttcagtcctgtcatgcgtaagaaagcgatcaaggttaagcacgtcaag
agacgagaaaagaagtttgacaagaaaaaagagtctcgtcgccacaagcagaagcagaag
cacaaagacaggaacaggcacagcgagaggggggatgttcgggacactggaggcttccgt
cagtgtttgggaccaaactgtgtggatgcatcaagacccggctccaaatactgttctgaa
gactgtggcatgaagttagcagccaaccggatctacgagatcctcccccagcggatccag
cagtggcagcagagtccctgcatcgccgaggagcacggtaaaaagcagctggagcggatc
cgcagggaccagcagaacgcccggctgcacctcacggagatggagcgacgcttccacgag
ctggagggcatcattgctaaagccaaggagcaggcagttcagcaggatgaggaggtgaat
gaaaatgatagtgaggacacagacctgcagattttctgtgtctcttgcagtcatcccatc
aatccaaaagtggcgctgaggcatatggagagatgctatgcaaagtatgagagtcagacc
tcctttggttccatgtaccccacaagaatagagggggcaacccgactcttctgtgacgtg
tacaacccccagagcaagacgtactgcaagaggcttcaggttttgtgtccagagcattcc
agagatcccaaggttccagtggatgaagtgtgtggatgccctctagtgaagaatgtgttt
gagctgaccaaagagtattgtagagtctccaaaaggaagtgcaacaaacattacaactgg
gaaaagctcaggagagccgaggtggacctggagcgagtccgggtgtggtacaagttggac
gaactgtttgagcaggagcggaacgtgaggacggccatgaccaacagagccggcctgctg
gctctgatgttgcaccaaactattcagcacgaccccgtgacaacggatctccgttgcagc
aaggatcggtag
DBGET
integrated database retrieval system