Cololabis saira (Pacific saury): 133451826
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Entry
133451826 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133451826
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133451826
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_5
U-box
zf-RING_6
Prok-RING_4
LMBR1
MRP-S31
SseC
Motif
Other DBs
NCBI-GeneID:
133451826
NCBI-ProteinID:
XP_061586952
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All DBs
Position
10:complement(8678525..8680275)
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AA seq
556 aa
AA seq
DB search
MAQKGDQLDQETFSCSICLEVLKDPVTIPCGHSYCMNCINNFWDEGEKKLPSCPQCKQTF
TPRPELVKNTMLAALREQLKKTGLQAAPADHCYAGPENVACDVCSERKLKAIKSCLVCLA
SYCEKHLQPHHDSSAFNKHKLVDPSKNLQDNICPRHDEVMKMFCRTDQKCICYLCSVDEH
KGHDTVSAAAERTERQREVEVSRQQIQQEIQDREKDVKLLQQEVKAINQSADKTVEDSEE
IFTELISLIQKRSSDVKQQIRSQQETEVSQVRELEGKLQQEITDLKRREADMKQLSDTED
HNQFLHNYPSLLPLSESTYSSSINIRPLRYFEDVAAALSEVRGRLQDILKDKWTNVSLTI
TDVDVLLSQPEPEPTSRARFLKYSFEITLDPNTANTQLLLSEGYRKVTFMKKRQSYSYHP
DRFTKWHQVLSREILTGHRYWEVEKKAGVVVAAVTYKNISRSGDESAFGGNDKSWALWCY
SDIYDFWYNDIKTSISGPQSSRLGVYLDHRAGVLSFYSVSETMTLLHRVQTTFTQPLHAG
VWVYGSGDSAELCKLR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaaggagatcagttggaccaggaaaccttttcttgttcgatctgtttggag
gttctaaaggatccggtgactattccctgtggacacagttactgtatgaactgtattaac
aacttctgggatgaaggagagaagaaactccccagctgtcctcagtgtaaacagacgttc
acaccgagacctgaactggtgaaaaacaccatgttagcagctttaagggagcagctgaag
aagactggactccaagctgctcctgctgatcactgctatgctggaccagaaaatgtggcc
tgtgatgtctgctctgagagaaaactgaaagctatcaagtcctgtttagtctgtctggcc
tcttactgcgagaaacaccttcaacctcatcatgattcatctgcattcaataaacacaag
ctggtggatccctccaaaaacctgcaggacaacatctgcccccgtcatgacgaggtgatg
aagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaacat
aaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagaggtggag
gtgagtcgacaacaaatccagcaggagatccaggacagagagaaagatgtgaagctgctt
cagcaggaggtgaaagccatcaatcagtctgctgataaaacagtggaggacagtgaggag
atcttcactgagctgatctctctcatccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgagtcaagtcagagagcttgaagggaagctgcagcag
gagatcactgacctgaagaggagagaggctgatatgaagcagctctcagacaccgaggac
cacaaccagtttctccacaactacccctcactgttaccactcagtgagtccacatactcc
tccagcatcaacatccgtcctctcaggtactttgaggatgtggcagcagctctgtcagag
gtcagaggtcgactacaggacatcctgaaagacaagtggacaaacgtctcattgaccatc
actgatgtggatgttttactgtcacaaccagaaccagaaccaacgagcagagctagattc
ttgaaatattcatttgaaatcactctggatccaaacacagcaaacacacagctgttactg
tcagaggggtacagaaaggtgacttttatgaagaaacgtcagtcttattcttatcatcca
gacagattcactaaatggcatcaggtcctgagtagagagattctgactggacatcgttac
tgggaggtggagaagaaagcaggggtagttgttgcagcagtcacatacaagaatatcagt
agatcaggggatgaaagtgcatttggaggaaatgacaaatcttgggcactatggtgttac
tcagacatatatgacttttggtacaacgacatcaaaacctccatctcaggtcctcagtcc
tccagattaggagtttacctggatcacagagcaggtgttctgtccttctacagcgtctct
gaaaccatgaccctcctccacagagtccagaccaccttcactcagccgctacacgctgga
gtttgggtttacggttctggagactcagctgagctctgtaaactcagatag
DBGET
integrated database retrieval system
