Cololabis saira (Pacific saury): 133451847
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Entry
133451847 CDS
T09849
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133451847
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133451847
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
Prok-RING_4
LMBR1
Gp58
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
133451847
NCBI-ProteinID:
XP_061586974
LinkDB
All DBs
Position
10:11129869..11133103
Genome browser
AA seq
551 aa
AA seq
DB search
MAQKGAQLYQETFSCSICLEVLKDPVTIPCGHSYCMNCIKNFWDDGEKKLPSCPQCRETF
IPRPVLVKSTMLAAVVEQLKKTGLQAAPADHCYAGPEDVACDFCSGRKLKAIKSCLVCLA
SYCEKHIQPHHDSSTFKKHKLMDPSKNLQDNICPRHDEVRKMFCRTDQKCICYLCSVDEH
KGHDTVSAAAERTERQREMEVSRQQIQQEIQDREKDVKLLQQEVEAINQSADKTVEDSEE
IFTELISLLQKRSSDVKQQIRSQQKTEVSRVRELEEKLQQEITDLKRRDAEMKQLTDTED
HNQFLHNYPSLSPLSESTHSSGISIRPLRYFEDVTAAVSEVRGQLQDILRDTWTNISLTI
TDVDVLLSEPKNRFLKYSCEITLDLNTVNTQLLLSEENRKVTFMEKRQSYSDHPDRFTER
RQVLSRESLTGRHYWEVEKKGEALVAVSYKNIGRSWGGEESAFGGNDKSWSLHCSSDRYG
FWYNSIKTSVSGPQSSRIGVFLDHRAGVLSFYSVSETMTLLHRVQTTFTQPLYAGVGIYS
PGHSAEFCKLK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagctcagctgtatcaggaaaccttttcttgttcgatctgtttggag
gttttaaaggatccggtgactattccctgtggacacagttactgtatgaactgtattaaa
aacttctgggatgatggagagaagaaactccccagctgtcctcagtgtagagagacattc
atcccaaggcctgtgctggtgaaaagcaccatgttagcagctgtagtggagcagctgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgcgatttctgctctggcagaaaactgaaagccatcaagtcctgtttagtctgtctggcg
tcttactgcgagaaacacattcaacctcatcatgattcatctacattcaagaaacacaag
ctgatggatccctccaagaacctgcaggacaacatctgcccccgtcatgatgaggtgagg
aagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaacat
aaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagatggag
gtgagtcgacaacaaatccagcaggagatccaggacagagagaaagatgtgaagctgctt
cagcaggaggtggaggccatcaatcagtctgctgataaaacagtggaggacagtgaggag
atcttcactgagctgatctctctcctccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcagaaaacagaagtgagtcgagtcagagagcttgaggagaagctgcagcag
gagatcactgacctgaagaggagagacgctgagatgaagcagctcacagacaccgaggac
cacaaccagtttctccacaactacccctcactgtcaccactcagtgagtccacacactcc
tccggcatcagcatccgtcctctcaggtactttgaggatgtcacagcagctgtgtcagag
gtcagaggtcaactacaggacatcctgagagacacgtggacaaacatctcactgaccatc
actgatgtggatgttttactgtcagaaccaaagaaccgattcttgaaatattcatgtgaa
atcactctggatctaaacacagtaaacacacagctgttactgtcagaggagaacagaaag
gtgacttttatggagaaacgtcagtcttattctgatcatccagacagattcactgaacgt
cgtcaggtcctgagtagagagagtctgactggacgtcattactgggaggtggagaagaaa
ggtgaagctttggtagcagtttcatacaagaatatcggcagatcatgggggggggaggaa
agtgcatttggaggaaatgacaaatcttggtcactacattgttcctcagacagatatgga
ttttggtacaacagcatcaaaacctctgtctcaggtcctcagagctccagaataggagtt
ttcctggatcacagagcaggtgttctgtccttctacagcgtctctgaaaccatgaccctc
ctccacagagtccagaccaccttcactcagccgctctacgctggagtcgggatttacagt
ccgggacactcagctgagttctgtaaactcaaatag
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