Cololabis saira (Pacific saury): 133451848
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Entry
133451848 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133451848
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133451848
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
Prok-RING_4
zf-RING_6
MRP-S31
LMBR1
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
133451848
NCBI-ProteinID:
XP_061586975
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All DBs
Position
10:11167241..11172711
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AA seq
562 aa
AA seq
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MQSLQGGEMAQKGVKLDQETFSCSICLEVLKDPVTIPCGHSYCMNCIKNYWDEGEKKIPS
CPQCRRTFTQKPELVKNTMFADLLEQLKKTGLQAAPADHCYAGPEDVACDFCSGRKLKAI
KSCLVCLASYCEKHLQPHHDVAPLKKHKLVDPSKNLQDNICPRHDEVMKMFCRTDQKCIC
YLCSVDEHKGHDTVTAAAERMERQKEVEVSQQQIQQEIQDRDKNVKLLQQEVEAINQSAD
KTVEDSEEIFTELISLLQKRSSDVKQQVRSQQETEVRRVRELEEKLQQEITDLKRRDAEM
KQLSDTEDQNQFLHNYPSLSPLSESTHSSSISIRPLRYFQDVTAAVSEVRGQLQDILRDT
WTNITVAITHVDVLLPQPEPKSRAGFLKYSFEITLDPNTVHTLLLLSEENRKVTLMKKHQ
SYSSHPERFSVVSQVLSREGLTGRHYWEVEKKADIVGVAVSYKNISRSGDESGFGLNYKS
WSLYCSSDRYLFWYNGITTSISGPQSSRIGVYLDHRAGVLSFYSVSETMTLLHRVQTTFT
QPLYAGVGIYSSGVSAEFCKLK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtctgcagggaggagaaatggcgcagaaaggagttaagctggaccaagaaacc
ttttcttgttcgatctgtttggaggttttaaaggatccggtgactattccctgtggacac
agttactgtatgaactgtattaaaaactactgggatgaaggagagaaaaaaatccccagc
tgtcctcagtgtagacggactttcactcagaaaccagagctggtgaaaaacaccatgttc
gctgatttattggagcagctgaagaagactggactccaagctgctccggctgatcactgc
tatgctggacctgaagatgtggcctgtgatttctgctctggaagaaaactgaaagccatc
aagtcctgtttagtctgtctggcctcttactgcgagaaacaccttcaacctcatcatgat
gtggctccattaaagaaacacaagctggtggatccctccaagaacctgcaggacaacatc
tgcccccgtcatgatgaggtgatgaagatgttctgtcgtacggatcagaagtgtatctgt
tatctctgctctgtggatgaacataaaggccacgacacagtcacagctgcagcagaaagg
atggagaggcagaaagaggtggaggtgagtcaacaacaaatccagcaggagatccaggac
agagataaaaatgtgaagctgcttcagcaggaggtggaggccatcaatcagtctgctgat
aaaacagtggaggacagtgaggagatcttcactgagctgatctctctcctccagaaaaga
agctctgatgtgaagcagcaggtcagatcccagcaggaaactgaagtgaggagagtcaga
gagctggaggagaagctgcagcaggagatcactgacctgaagaggagagacgctgagatg
aagcagctctcagacactgaggaccaaaaccagtttctccacaactacccctcactgtca
ccactcagtgagtccacacactcctccagcatcagcatccgtcctctcaggtactttcag
gatgtgacagcagctgtgtcagaggtcagaggtcagctacaggacatcctgagagacacg
tggacaaacatcaccgtggccatcactcatgtggatgttttactgccacaaccagaacca
aagagcagagctggattcttgaaatattcatttgaaatcactctggatccaaacacagta
cacacacttctgttactgtcagaggagaacagaaaggtgactttaatgaagaaacatcag
tcttattctagtcatccagaaagattcagtgttgtttctcaggtcctgagtagagagggt
ctgactgggcgtcattactgggaggtggagaagaaagcagatatagttggtgtagcagtt
tcatacaagaatatcagcagatcaggggatgaaagtggatttggattaaattacaaatct
tggtcactatattgttcctcagacagatatttattttggtacaacggcatcacaacctcc
atctcaggtcctcagagctccagaataggagtttacctggatcacagagcaggtgttctg
tccttctacagcgtctctgaaaccatgaccctcctccacagagtccagaccaccttcact
cagccgctctacgctggagtcgggatttacagttctggagtctcagctgagttctgtaaa
ctcaaatag
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