Cololabis saira (Pacific saury): 133453082
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Entry
133453082 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133453082
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133453082
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_10
zf-RING_6
HycH
zf-RING_11
UPF0370
MRP-S31
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
133453082
NCBI-ProteinID:
XP_061588928
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All DBs
Position
10:42057021..42059007
Genome browser
AA seq
578 aa
AA seq
DB search
MAQKGVQLDQETFSCSICLDLLKDPVTIPCGHSYCMSCIKNYWDEGEKKIPSCPQCRETF
IPKPVLVKNTMLAALVEEMKKTGLQAAPADHCYAGPEDVACDVCSGRKLKAVKSCLFCLA
SYCKNHLQPHHDVAPLKKHKLVDPSKNLQDNICPRHDEVMKMFCRTDQKCICYLCSVDEH
KGHDTVSAAAERTERQREMEVSRQQIQQEIQVREKDVKLLQQEVEAINQSADKTVEDSEE
IFTELISLLQKRSSDVKQQIRSQQETEVRRVRELEEKLQQEIGDLKRRDAEMKQLRDIED
HNQFLHNYPSLPPLSESTHSSSISIRPLTHSSSISIRPLTHSSSISIRPLRYFQDVTAAV
SEVRGRLQDILRDTWTNVSLAVTDVDVLLPQPEPKSRAGFLKYSCEITLDPNTVNTRLLL
SEENRKVTFMNQHQSYSSHPDRFTNVLQVLSRESLTGRHYWEVEKKAGGVYVAVSYKNII
RSGVEESGFGGNDKSWSLYCYSDSYVFWYNSIDTSVSGPQSSRIGVYLDHRAGVLSFYSV
SGTMTLLHRVQTSFTQPLHAGVQVAYTVGASAEFCKLK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccaggaaaccttttcttgttcgatctgtttggat
cttttaaaggatccggtgactattccctgtggacacagttactgtatgagctgtattaaa
aactactgggatgaaggagagaagaaaatccccagctgtcctcagtgtagagagacattt
ataccgaagcctgtgctggtgaaaaacaccatgttagcagctttagtggaggagatgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgctctgggagaaaactgaaagctgttaagtcctgtttattctgtctggcc
tcttactgcaagaatcaccttcaacctcatcatgatgtggctccattaaagaaacacaag
ctagtggatccctccaagaacctgcaggacaacatctgcccccgtcatgatgaggtgatg
aagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaacat
aaaggccacgacacggtctcggctgcagcagaaaggactgagaggcagagagagatggag
gtgagtcgacaacaaatccagcaggagatccaggtcagagagaaagatgtgaagctgctt
cagcaggaggtggaggccatcaatcagtctgctgataaaacagtggaggacagtgaggag
atcttcactgagctgatctctctcctccagaagagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgaggagagtcagagagctggaggagaagctgcagcag
gagatcggtgacctgaagaggagagacgctgagatgaagcagctcagagacatcgaggac
cacaaccagtttctccacaactacccctcactgccaccactcagcgagtccacacactcc
tccagcatcagcatccgtcctctcacacactcctccagcatcagcatccgtcctctcaca
cactcctccagcatcagcatccgtcctctcagatactttcaggatgtgacagcagctgtg
tcagaggtcagaggtcgactacaggacatcctgagagacacgtggacaaacgtctcactg
gccgtcactgatgtggatgttttactgccacaaccagaaccaaagagcagagctggattc
ttgaaatattcatgtgaaatcactctggatccaaacacagtaaacacacggctgttactg
tcagaggagaacagaaaggtgacttttatgaaccaacatcagtcttattctagtcatcca
gacagattcactaatgttcttcaggtcctgagtagagagagtctgactggacgtcattac
tgggaggtggagaagaaagcaggtggagtttatgtagcagtttcatacaagaatatcatc
agatcaggggtggaggaaagtggatttggaggaaatgacaaatcttggtcactatattgt
tactcagacagttatgtattttggtacaacagcatcgacacctccgtctcaggtcctcag
agctccagaataggagtttacctggatcacagagcaggtgttctgtccttctacagcgtc
tctggaaccatgaccctcctccacagagtccagacctccttcactcagccgctacacgct
ggagttcaggttgcttacactgttggagcctcagctgagttctgtaaactcaaatag
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