Cololabis saira (Pacific saury): 133454885
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Entry
133454885 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133454885
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133454885
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_5
zf-RING_10
U-box
zf-RING_6
PRP1_N
zf-RING_11
Prok-RING_4
V_ATPase_I
LMBR1
MRP-S31
Motif
Other DBs
NCBI-GeneID:
133454885
NCBI-ProteinID:
XP_061589584
LinkDB
All DBs
Position
11:complement(1166287..1169592)
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AA seq
559 aa
AA seq
DB search
MAQQENQLDPVKFSCSICLDLLKDPVTVPCGHSYCLKCIKDFWDEGEKKLPSCPQCRRTF
IPRPELLKNTMLADLMEELKKTGLQAAPADHCYAGPEDVACDVCSGRKLKAVKSCLFCLA
SYCQKHLQPHRDSSTFKTHQLVDPSKNLQDNICPRHGEVRKMFCRTDQKCICYLCSVDEH
KGHDTVTAAAERTERQREMEVRRQQIQQQIQDREKDVKLLQQEVEAIDQSADKTVEDSEE
IFTELISLLQKRRSEVKQQVRSQQETEVRRVRELEEKLQQEIRDLKRRDAEMKQLSDTED
HNQFLHSCPSLPPLSQSTHSSGISIRPLRYFQDVAAAVSEVRGRLQDILRDTWTNVSLAV
ADVDVLLSRPEPEPEPTSRAGFLKYSSEITLDPNTVNTGLLLSVQNRKVTVMNQRQSYSD
HPDRFSDYSQVLSRESLTGRHYWEVVETAGYVVVAVSYKNISRSGGECVFGYNDKSWSLG
CSSDSYVFWYNSIETSIPGPLSSRIGVYLDHRAGVLSFYSVSGTTTLLHRVQTSFTRPLH
AGVWIYSGPGDSAEFCKLK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaggaaaaccagctcgatccagttaaattctcttgttccatctgtttggat
cttttaaaggatccggtgactgttccctgtggacacagttactgtctgaagtgcattaag
gacttctgggatgaaggagagaagaaactccccagctgtcctcagtgtcgacgcacgttt
attccgaggcctgagctgctgaaaaacaccatgttagctgatttaatggaggaactgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgctctgggagaaaactgaaagctgtcaagtcctgtttattctgtctggcc
tcttactgccagaaacaccttcaacctcaccgtgattcatctacattcaagacacaccag
ctggtggatccctccaagaacctgcaggacaacatctgcccccgtcacggtgaggtgagg
aagatgttctgtcgtaccgatcagaagtgtatctgttatctctgctctgtggatgaacat
aaaggccacgacacggtcacggctgcagcagaaaggactgagaggcagagagagatggag
gtgagacgacaacaaatccagcagcagatccaggacagagagaaagatgtgaagctgctt
cagcaggaggtggaggccatcgatcagtctgctgataaaacagtggaggacagtgaggag
attttcactgagctgatctctctcctccagaagaggaggtctgaggtgaagcagcaggtc
agatcccagcaggaaactgaagtgaggagagtcagagagctggaggagaagctgcagcag
gagatcagggacctgaagaggagagacgctgagatgaagcagctctcagacaccgaggac
cacaaccagttcctccacagctgcccctcactgccaccactcagtcagtccacacactcc
tccggcatcagcatccgtcctctcaggtactttcaggacgtggcagcagccgtgtcagag
gtcagaggtcgactacaggacatcctgagagacacgtggacaaacgtctcactggccgtc
gctgacgtggatgttttactgtcacgaccagaaccagaaccagaaccaacgagcagagct
ggattcctgaagtattcatctgaaatcactctggatccaaacacagtaaacacagggctg
ttactgtcagtgcagaacagaaaggtgacggttatgaaccaacgtcagtcttattctgat
catccagacagattcagtgattattctcaggttctgagtagagagagtctgactggacgt
cattactgggaggtggtggagacagcaggttatgttgttgtagcagtttcatacaagaat
atcagcagatcagggggggaatgtgtatttggatataatgataaatcttggtcactaggt
tgttcctcagacagttatgtattctggtacaacagcatcgaaacctccatcccaggtcct
ctgagctccagaataggagtttacctggatcacagagcaggagttctgtccttctacagc
gtctctggaaccacgaccctcctccacagagtccagacctccttcactcggccgctccac
gctggagtctggatttactccggtcctggagactcagctgagttctgtaaactcaaataa
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