Cololabis saira (Pacific saury): 133458003
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Entry
133458003 CDS
T09849
Symbol
rbfox2
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133458003 (rbfox2)
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133458003 (rbfox2)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
133458003
NCBI-ProteinID:
XP_061593472
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All DBs
Position
1:complement(10135151..10219804)
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AA seq
466 aa
AA seq
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MLMSTDVASIMLPVSRALLERDRELEPLAGVLAGPGGAPAAALRGMKRGDPEPDAQPAAA
LLEPAGAECKRPRIDGAGLAEVGQSNDPLTLGYHGYPSHSQGSQDSAGGQEGLVPPPFST
FPPPPPPPPQNGLTLDYGGSLYAAGAVQGPVEAGGAGNGAANAANSLSAQSDGSSQIDGQ
SGVGSGGGGGGGGPGEDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNE
RGSKGFGFVTFESSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGLA
ALPYAGWKLSPMVGAMYSPELYTVCPGLVPGFPYPAAAAAASTAAAAATFRGAHLRGRAR
PVYSAVRAAVPQPAIPTYPGVMAYQDGFYGAAADLYGGYAAYRYAQPTAVATPAAAAAAA
AAAAYSDSYGRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcctccatcatgctgccggtgtcccgggctctgctggag
cgggaccgggagctggagcccctggccggggtgctggccggcccgggcggagccccggcg
gccgcgctgcggggcatgaagcgcggggacccggagcccgacgcgcagccggcggccgcg
ctgctggagccggccggggcggagtgcaagcggccccgcatcgacggcgcggggctggcg
gaggtgggccagagcaacgatcctttgaccctcggttaccatggatacccgtctcacagt
cagggttctcaggatagtgctggcggtcaggagggactcgtacccccacctttctccacg
ttcccaccccctccacccccacccccccagaacggcctgaccttggattacgggggcagc
ctttatgcagcgggggccgtccagggtcccgtggaggccgggggagccggaaacggcgct
gccaacgccgccaacagtctcagtgcccaatcggacgggtcctcccagatcgacggacag
tctggagtcggctcaggaggagggggtggcggtgggggtcccggggaggattcagatgcc
aaggggacccccaaacggctccacgtatccaacatccccttccgcttccgagaccccgac
ttgcggcagatgtttgggcaatttgggaagatcctggacgtggagatcatcttcaacgag
aggggctccaagggctttggttttgtaacgttcgagtcgagtgcggatgcggagcgggcc
agagagaagctgcacggcaccctggttgaagggcgtaaaatcgaggtcaataacgccaca
gccagagtgatgacaaacaagaagatgacgacaccgtactccaacggagaaggcctcgca
gcgctaccatacgccggatggaagttgagtccgatggttggagccatgtacagcccggag
ctttacacagtgtgtcccggtttagttcccgggttcccgtacccggcagcggcagctgcc
gcctccaccgcggccgccgccgccaccttccggggcgcccacctgcggggccgcgcccgg
cccgtctacagcgcggtccgggccgccgtgccgcagccggccatccccacgtacccgggt
gtgatggcctatcaggatggtttttacggcgcagcggccgacctctacggtggatatgca
gcatatcgttacgcccagccgactgctgtagcgactcctgcggcggcagcagcagccgcc
gccgccgcggcgtacagtgacagctacggacgagtttacacggcagacccctaccacgct
gctctcgccccggcggcctacggcgtcggagccatggccacgctgtacaggggaggctac
agtagatttgccccttactaa
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