Cololabis saira (Pacific saury): 133459413
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Entry
133459413 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133459413
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133459413
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_10
zf-RING_5
U-box
zf-RING_6
Prok-RING_4
LMBR1
zf-RING_4
BshC
Motif
Other DBs
NCBI-GeneID:
133459413
NCBI-ProteinID:
XP_061595294
LinkDB
All DBs
Position
14:46959477..46966873
Genome browser
AA seq
555 aa
AA seq
DB search
MAQQENQLDPVKFSCSICLDLLNDPVAIPCGHSYCMKCIKDFWDEGEKKLPSCPQCRRTF
IPRPELLKNTMLADLMEELKKTGLQAAPADHCYAGPGDVACDVCSGRKLKAVKSCLVCLA
SYCQKHLQPHRDAAPLKKHQLVDPSKNLQDNICPRHGEVRKMFCRTDQKCICYLCSVDEH
KGHDTVSVAAERTERQREMELSRQQIQQQIQEREKDVKLLQQEVEAIDQSADKTVEGSEE
IFTELISLLQKRSSDVKQQIRSQQETEVRRVRELEEKLQQEIRDLKRRDAEMKQLTDTED
HNQFLHNYPSLSPLSQSTHSSSISIRPLRYFQDVAAAVSEVRGRLQDILRDTWTNVSLAV
ADVDVLLSRPEPTSRAGFLKYSCEITLDPNTVNTRLILSEQNRKATRMDQPQSYSGHPDR
FSYYSEVLSRESLTGRRYWEVEKTAGGVGVAVSYKNISRSGGGSSFGSNDKSWSLECYSD
SYIFMYNSIKTVIPSPASSRIGVYVDHRAGVLSFYSVSGTMTLLHRVQTSFTQPLHAGVW
IYNFPGDSAEFCKLK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaggaaaaccagctcgacccagttaaattctcttgttccatctgtttggat
cttttaaatgatccggtggctattccctgtggacacagttactgtatgaagtgtattaag
gacttctgggatgaaggcgagaagaaactccccagctgtcctcagtgtcgacgcacgttt
attccgaggcctgagctgctgaaaaacaccatgttagctgatttaatggaggaactgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctggagacgtggcc
tgtgatgtctgctctgggaggaaactgaaagctgtcaagtcctgtttggtctgtctggcc
tcttactgccagaaacaccttcaacctcaccgtgatgcggctccactaaagaaacaccag
ctggtggatccctccaagaacctgcaggacaacatctgcccccgtcacggtgaggtgagg
aagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaacat
aaaggccacgacacggtctcagttgcagcagaaaggacggagaggcagagagagatggag
ctgagtcgacaacaaatccagcagcagatccaggaaagagagaaagatgtgaagctgctt
cagcaggaggtggaggccatcgatcagtctgctgataaaacagtggagggcagtgaggag
atcttcactgagctgatctctctcctccagaagagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgaggagagtcagagagctggaggagaagctgcagcag
gagatcagggacctgaagaggagagacgctgagatgaagcagctcacagacaccgaggac
cacaaccagttcctccacaactacccctcactgtcaccactcagtcagtccacacactcc
tccagcatcagcatccgtcctctcaggtactttcaggacgtggcagcagctgtgtcagag
gtcagaggtcgactacaggacatcctgagagacacgtggacaaacgtctcactggccgtc
gctgacgtggatgttttactgtcacgaccagaaccaacgagcagagctggattcctgaag
tattcctgtgaaatcactctggatccaaacacagtaaacacacggctgatactgtcagag
cagaacagaaaggcgactcggatggaccaacctcagtcttattctggtcatccagacaga
ttcagttattattctgaggtcctgagtagagaaagtctgactggccgtcgttactgggag
gtggagaagacagcaggtggagttggtgtagcagtttcatacaagaatatcagcagatca
gggggggggagttcatttggatctaatgacaaatcttggtcactagaatgttactcagac
agttatatattcatgtacaacagcatcaaaaccgtcatcccaagtcctgcttcctccaga
ataggagtttacgtggatcacagagcaggagttctgtccttctacagcgtctctggaacc
atgaccctcctccacagagtccagacctccttcactcagccgctacacgctggagtctgg
atttacaactttcctggagactcagctgagttctgtaaactcaaataa
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integrated database retrieval system
