Cololabis saira (Pacific saury): 133459417
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Entry
133459417 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133459417
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133459417
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_10
zf-RING_5
zf-RING_6
U-box
LMBR1
MRP-S31
Motif
Other DBs
NCBI-GeneID:
133459417
NCBI-ProteinID:
XP_061595297
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Position
14:44823720..44825993
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AA seq
561 aa
AA seq
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MAQQENQLDPVKFSCSICLDLLKDPVAIPCGHSYCMKCIKDFWDEGEKKLPSCPQCQHTF
IPRPELLKNTMLADLMEELKKTGLQAAPADHCYAGPEDVACDVCSGRKLKAVKSCLVCLA
SYCQKHLQPHRDAAPLKKHQLVDPSENLQDNICPRHAEVRKMFCRTDQKCICYLCSVDEH
KGHDTVTAAAERTERQREMEVRRQQIQQQIQDREKDVKLLQQEVEAINQSADNTVEDSEE
IFTELISLLQKRSSEVKQQIRSQQETEVRRVRELEEKLQQEISDLKRRDAEMKQLSDTED
HNQFLQSFPSLSPLSQSTHSSSISIRPLTHSSSISIRPLRYSVSEVRGRLQDILRDTWTN
VSLAVTEVDVLLSQPQPEPTSRAGFLKYSCEITLDPNTVSPYLLLSEENRKATRMNQPQS
YSDHPDRFSYPQVLSRESLTGRRYWEVETTAARDIEVAVSYKSIRRSGGSAFGYNDKSWS
LVCSSGSYVFIYNSIRTSISGPETSRIGVYLDHRAGVLSFYSVSGTMTLLHRVQTSFTQP
LHAGVWIYNVPGDSAEFCKLK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaggaaaaccagctcgacccagttaaattctcttgttccatctgtttggat
cttttgaaggatccggtggctattccctgtggacacagttactgtatgaagtgcattaag
gacttctgggatgaaggagagaagaaactccccagctgtcctcagtgtcaacacacgttt
attccgaggcctgagctgctgaaaaacaccatgttagctgatttaatggaggaactgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagacgtggcc
tgtgatgtctgctctgggaggaaactgaaagctgtcaagtcctgtttggtctgtctggcc
tcttactgccagaaacaccttcaacctcaccgtgatgcggctccactaaagaaacaccag
ctggtggatccctccgagaacctgcaggacaacatctgcccccgtcacgctgaggtgagg
aagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaacat
aaaggccacgacacggtcacagctgcagcagaaaggactgagaggcagagagagatggag
gtgagacgacaacaaatccagcagcagatccaggacagagagaaagatgtgaagctgctt
cagcaggaggtggaggccatcaatcagtctgctgataataccgtggaggacagtgaggag
atcttcactgagctgatctctctcctccagaagagaagctctgaggtgaagcagcagatc
agatcccagcaggaaactgaagtgaggagagtcagagagctggaggagaagctgcagcag
gagatcagtgacctgaagaggagagacgctgagatgaagcagctctcagacaccgaggac
cacaaccagttcctccagagcttcccctcactgtcaccactcagtcagtccacacactcc
tccagcatcagcatccgtcctctcacacactcctccagcatcagtatccgtcctctcagg
tactccgtatcagaggtcagaggtcgactacaggacatcctgagagacacgtggacaaac
gtctcactggccgtcactgaggtggatgttttactgtcacaaccacaaccagaaccaacg
agcagagctggattcctgaaatattcatgtgaaatcactctggatccaaacacagtaagc
ccatatctgttactgtcagaggagaacagaaaggcgactcggatgaaccaacctcagtct
tattctgatcatccagacagattcagttatcctcaggtcctgagtagagagagtctgact
ggacgtcgttactgggaggtggaaacgacagcagcgcgtgatattgaggtagcagtttca
tacaagagtatccgcagatcagggggaagtgcatttggatataatgataaatcttggtca
ctagtttgttcctcaggcagttatgtattcatttacaacagcatcagaacctctatctca
ggtcctgagacctccagaataggagtttacctggatcacagagcaggagttctgtccttc
tacagcgtctctggaaccatgaccctcctccacagagtccagacctccttcactcagccg
ctccacgctggagtctggatttacaacgttcctggagactcagctgagttctgtaaactc
aaataa
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