Cololabis saira (Pacific saury): 133462261
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Entry
133462261 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133462261
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133462261
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
U-box
zf-RING_5
zf-RING_10
Prok-RING_4
zf-RING_6
zf-ANAPC11
zf-rbx1
LMBR1
MesX
zf-RING_11
MRP-S31
Motif
Other DBs
NCBI-GeneID:
133462261
NCBI-ProteinID:
XP_061599391
LinkDB
All DBs
Position
16:complement(3128290..3131015)
Genome browser
AA seq
601 aa
AA seq
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MAQQENQLDRVKFSCSICLDLLKDPVTIPCGHSYCMKCIKDFWDEEEKKIPSCPLCRETF
TPRPVLVKNTMLADLMEDMKKTGLQAAPADHCYAGPEDVACDFCSGRKLKAVKSCLFCLA
SYCQKHLQPHHDVAPLKKHKLVDPSENLQDNICSRHGEVMKMFCRTDQKCICYLCSVDEH
KGHDTVSAAAERTERQREMEVKRQQIQQEIQDREKDVKLLQQEVEAIDQSADKTVEDSEE
IFTELISLLQKRSSDVKQQIRSQQETEVRRVRELEEKLQQEISDLKRRDAEMKQLRDIED
HNQFLHNYPSLSPLSESTHSSSISIRPLTHSSSISIRPLTHSSSISIRPLTHSSSISIRP
LTHSSSISIRPLRYFQDVTAAVSEVRGRLQDILRDTLTNVSQAVTEVDVLLSQPEPTSRA
GFLKYSCEITLDPNTVHTWLLLSEENRKVTVMNQRQSYSSHPDRFTNLHQVLSRESLTGR
HYWEVEKKACVVFVAVSYKNISRSGGLNKSGFGYNDKSWSLRCSSESYVFNLNDIQTSIS
GPQSSRIGVYLDHRAGVLSFYSVSGTMTLLHRVQTSFTQLLHAGVHVYSPPGASAEFCKL
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaggaaaatcagctcgaccgggttaaattctcttgttccatctgtttggat
cttttaaaggatccggtgactattccctgtggacacagttactgtatgaagtgtattaag
gacttctgggatgaagaggagaagaaaatccccagctgtcctctgtgtagagagactttt
actccgaggccggtgctggtgaaaaacaccatgttagctgatttaatggaggacatgaag
aagactggactccaagctgctcctgctgatcactgctatgctggacctgaagacgtggcc
tgtgatttctgctctgggagaaaactgaaagctgtcaagtcctgtttattctgtctggcc
tcttactgccagaaacaccttcaacctcatcatgatgtggctccattaaagaaacacaag
ctggtggatccctccgagaacctgcaggacaacatctgctcccgtcacggtgaggtgatg
aagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaacat
aaaggccacgacacagtctcagctgcagcagaaaggacggagaggcagagagagatggag
gtgaaacgacaacaaatccagcaggagatccaggacagagagaaagatgtgaagctgctt
cagcaggaggtggaggccatcgatcagtctgctgataaaacagtggaggacagtgaggag
atcttcactgagctgatctctctcctccagaagagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgaggagagtcagagagctggaggagaagctgcagcag
gagatcagtgacctgaagaggagagacgctgagatgaagcagctcagagacatcgaggac
cacaaccagttcctccacaactacccctcactgtcaccactcagtgagtccacacactcc
tccagcatcagcatccgtcctctcacacactcctccagcatcagcatccgtcctctcaca
cactcctccagcatcagcatccgtcctctcacacactcctccagcatcagcatccgtcct
ctcacacactcctccagcatcagcatccgtcctctcaggtactttcaggatgtgacagca
gctgtgtcagaggtcagaggtcgactacaggacatcctgagagacacgttgacaaacgtc
tcacaggccgttactgaggtggatgttttactgtcacaaccagaaccaacgagtagagct
ggattcttgaaatattcatgtgaaatcactctggatccaaacacagtacacacatggctg
ttactgtcagaggagaacagaaaggtgacagttatgaaccaacgtcagtcttattctagt
catccagacagattcactaatcttcatcaggtcctgagtagagagagtctgactggacgt
cattactgggaggtggagaagaaagcatgtgtagtttttgtagcagtttcatacaagaat
atcagcagatcaggggggttgaataaaagtggatttggatataatgacaaatcttggtca
ctacgttgttcctcagaaagttatgtatttaatctcaacgacatccaaacctccatctca
ggtcctcagagctccagaataggagtttacctggatcacagagcaggtgttctgtccttc
tacagcgtctctggaaccatgaccctcctccacagagtccagacctccttcactcagctg
ctacacgctggagttcatgtttactcccctcctggagcctcagctgagttctgtaaactc
aaatag
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