Cololabis saira (Pacific saury): 133462596
Help
Entry
133462596 CDS
T09849
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133462596
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133462596
BRITE hierarchy
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
SPRY
zf-C3HC4
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-RING_10
zf-RING_5
LMBR1
HMMR_N
MRP-S31
U-box
C5HCH
Gp58
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
133462596
NCBI-ProteinID:
XP_061599897
LinkDB
All DBs
Position
16:complement(12406765..12408624)
Genome browser
AA seq
557 aa
AA seq
DB search
MAQKGDQLDRETFSCLICAEVLKDPVTIPCGHSYCMDCINNFWDEDENKLPSCPQCRRTF
TPRPELAKSTMLAALMEQLKKIGLQAAPADHCYAGPEDVACDVCSGRKLKAIKTCLFCLA
SYCEKHLQPHYDSSTFKKHKLVDPFKNLQDNICPRHDEVMKMFCRTDQKCICYLCSVDEH
KGHNTVSAAAERTERQREMEVSLQQIQQEIQDREKDVKLLQQEVEAINQSADETVEDSEE
IFTELISLLQKRSSDVKQQIRSQQETEVSRVRELEEKLQQEITDLKRRDAEMKQLSDTED
HNQFLHSYPSLSPLSESTHSSSISIRPLRYFEDMKAAMSEFRGQLQDILRDMWTNFSLTI
AEVDVLLSEPEPEPKSRAGFLKYSCEITLDPNTAEKELFLSEENRKVTLVDLLHYLSDHP
DRFTAYSQVLSRESLTGRHYWEVEKKEGRVVVAVSYKNISRSGYESGFGFNDTSWALYCS
SDSYEFWYNNIQTSISSPQSSRIAVYLDHRAGVLSFYSVSETMTLLHRVQTTFTQPLYAG
VLFFTGSGDSAEFCKLR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagatcagctggaccgggaaaccttttcttgtttgatctgtgcggag
gttttaaaggatccggtgactattccctgtggacacagttactgtatggactgtattaac
aacttctgggatgaagatgagaataagctccccagctgtcctcagtgtagacggacgttc
acaccgagacctgagctggcaaaaagcaccatgttagcagctttaatggagcagctgaag
aagattggacttcaagctgctcctgctgatcactgctatgctggacctgaagatgtggcc
tgtgatgtctgctctggaaggaaactgaaagccatcaaaacgtgtttattctgtctggcc
tcttactgcgagaaacaccttcaacctcattatgattcatctacattcaagaaacacaag
ctggtggatcccttcaagaacctgcaggacaacatctgcccccgtcatgatgaggtgatg
aagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaacat
aaaggccacaacacagtctcagctgcagcagaaaggactgagaggcagagagagatggag
gtgagtctgcaacaaatccaacaggagatccaggacagagagaaagatgtgaagctgctt
cagcaggaagtggaggccatcaatcagtctgctgacgaaacagtggaggacagtgaggag
atcttcactgagctgatctctctcctccagaaaagaagctctgatgtgaagcagcagatc
agatcccagcaggaaactgaagtgagtcgagtcagagagcttgaggagaagctgcagcag
gagatcactgacttgaagaggagagacgctgagatgaagcagctctcagacaccgaggac
cacaaccagtttctccacagctacccctcactgtcaccactcagtgagtccacacactcc
tccagcatcagcatccgtcctctcaggtactttgaggatatgaaagcagctatgtccgag
ttcagaggtcaactacaggacattctgagagacatgtggacaaacttctcactgaccatc
gctgaggtggatgttttactgtcagaaccagaaccagaaccaaagagcagagctggattc
ttgaagtattcatgtgaaatcactctggatccaaacacagcagaaaaagagctgtttctg
tcagaggagaacagaaaggtgactttggtggacctacttcattatctttctgatcatcca
gacagattcactgcatattctcaggtcctgagtagagagagtctgactggccgtcattac
tgggaggtggagaagaaagaaggtagagttgttgtagcagtttcatacaagaatatcagc
agatcagggtatgaaagtggatttggatttaatgacacatcttgggcactatattgttcc
tcagacagttatgaattttggtacaacaacatccaaacctccatctcaagtcctcagagc
tccagaatcgcagtttacctggatcacagagcaggtgttctgtccttctacagcgtctct
gaaaccatgaccctcctccaccgagtccagaccaccttcactcagccgctctacgctggg
gttttgtttttcactggttctggagactcagctgagttctgtaaactcagatag
DBGET
integrated database retrieval system
