Corynebacterium sanguinis: E3227_10495
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Entry
E3227_10495 CDS
T06569
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
csan
Corynebacterium sanguinis
Pathway
csan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E3227_10495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csan03021
]
E3227_10495
03019 Messenger RNA biogenesis [BR:
csan03019
]
E3227_10495
Transcription machinery [BR:
csan03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
E3227_10495
Messenger RNA biogenesis [BR:
csan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E3227_10495
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
QDR78427
LinkDB
All DBs
Position
complement(2172242..2174173)
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AA seq
643 aa
AA seq
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MTDTGNAAHGATQGNDHQDLATMKLPELRKLAAEKGLKGISALRKGDLIQAITTGEVPKR
ASAAAPEEAAEAAAPRRRATRRAGGAAEADNAGADNSGANNADNSGSEDERRGQDSSSQD
NSSQDEQRYESRSAARRARRNRARNSGGEGSNEGSHDNEDGNNAQDDNRDNHRNHDGDNR
DNRDDRGDNRDSRDSRNNNRNHGNDDRNRDNQSNDDGNRRGRRNRRNRNRNGRDDNRDNR
DNNRNNNQDFNPEDLQEVAGIVDVVDNNTAFVRTTGYRASQADVFIHNKLVRQNGLRSGD
AVIGQVRANGQSHSHGNGRNRQRYNQLVRVDSVNAMSPENAKQRKEFHKLTPLYPNQRLR
LETEPNILTTRVIDLVMPLGKGQRALIVSPPKAGKTTIMQNIANAIATNNPECYLMVVLV
DERPEEVTDMQRSVKGEVISSTFDRPPSEHTAVAELAIERAKRLVEMGQDVVVLLDSITR
LGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIEEGGSLTIIATAMVETGSAGDT
VIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLAPEEARIMHKLRRILSA
LDPQQSIDMLIKQLKKTKSNGEFLMGVAQSAPMAADQNEEEYL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacacgggcaatgctgcacacggcgctacgcaaggcaatgaccaccaagacctg
gcgacaatgaagctccctgagctgcgcaagctggccgcagagaagggtctgaagggcatt
tccgctttgcgcaagggcgacctgatccaggctatcaccaccggtgaggtgccgaagcgg
gcttcagcggcggcgccggaggaggcggccgaggctgccgccccccgccgccgcgcgacc
cgacgggccggcggtgcagccgaggccgataacgcaggcgctgacaactcgggcgctaac
aacgccgacaactccggttccgaggacgagcgccgcggccaggacagctcctcgcaggac
aactcctcgcaggacgagcagcgctacgagtcgcgatctgcggcgcgccgggcacgtcgc
aaccgcgcccgtaacagcggtggcgaggggtcgaacgagggctcccacgacaacgaagac
ggcaacaacgcgcaggacgataaccgcgacaaccaccgcaaccacgacggggacaaccgc
gacaaccgggatgatcgcggcgacaaccgcgacagccgcgatagccgcaacaacaaccgc
aaccacggcaacgacgaccgcaaccgggacaaccagtccaacgacgacggcaaccgccgc
ggtcgccgcaaccgtcgcaaccgcaaccgcaacggccgcgacgacaacagggacaaccgg
gataacaaccgcaacaacaaccaggacttcaaccctgaggacctgcaggaagttgccggc
atcgtcgacgtagtggacaataacaccgcctttgttcgcaccaccggttaccgcgccagc
caggcggacgtgttcatccacaacaagctggtgcgccagaacggcctgcgctccggtgac
gcggtgattggccaggtccgtgccaacggccagagccactcccacggcaacggacgcaac
cgccagcgctacaaccagcttgtgcgcgtcgattccgtcaacgccatgagcccggagaac
gcgaagcagcgcaaggagttccacaagctcaccccgctgtacccgaaccagcgcctgcgt
ttagagacggagccgaacatactgaccacgcgcgtgatcgacctggtcatgccgctgggt
aagggccagcgcgcgctgatcgtctccccgccgaaggccggcaagacgacgatcatgcag
aacatcgcgaacgcgattgccacgaacaacccggagtgctacctcatggtcgtgcttgtc
gacgagcgccccgaggaagtcaccgacatgcagcgctcggttaagggcgaggtcatttcc
tcgacgttcgaccgcccgccgtcagagcacaccgccgtcgctgagctggccatcgagcgc
gccaagcgcctggtggagatgggccaagacgtcgtcgtcctgctcgactcgatcacccgc
ctcggccgcgcgtacaacaactcctcgccggcgtcgggccgcatcctgtccggtggtgtc
gactccaatgcgctgtacccgccgaagcgtttcctgggtgccgcgcgcaatatcgaggag
ggcggctcgctgacgatcatcgccacggcgatggtggagacgggttccgccggcgacacc
gtgatctttgaggagttcaagggcacgggcaatgccgagctcaagctcgatcgcaagatc
gcagagcgccgcgtcttcccggctgtggacgtcaacccttccggcacccgcaaggacgag
ctcctgctggcaccggaggaggcgcgcatcatgcacaagctgcgccgcatcctctccgcg
ctcgacccgcagcagtccatcgacatgctgatcaagcagctgaagaagacgaagtccaac
ggcgagttcctcatgggtgtcgcgcagtcggcgccgatggcggctgaccagaacgaggag
gaatacctctga
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