Camelina sativa (false flax): 104701243
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Entry
104701243 CDS
T05044
Name
(RefSeq) polyadenylation and cleavage factor homolog 1-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104701243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104701243
03019 Messenger RNA biogenesis [BR:
csat03019
]
104701243
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104701243
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
104701243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
104701243
NCBI-ProteinID:
XP_010415192
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All DBs
Position
7:complement(15968986..15970539)
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AA seq
432 aa
AA seq
DB search
MASTGSFSNQRNAPFQNANAGATLKRGINDNRGYGGGHYQEERNRYAPPQKRFRSQPQPQ
PQQQQTQFRSGKIPLYHHPHGSSNNNMSRVSSQSYNNYGVDVIASNSSFPLRNNVSSNTN
NYQKPFVGFGNNPNPQIVPVPLPCRKLYDDVALDSLPEWVPTHQSVSRTLTPNYPVPTTN
FVPNTTVQAPVLTNYSNMASVVSQSMSQPIVLSKQLIALLSVLNNEKEKEKPTSEASKPG
ELPLGLSFDNPSSLNVRHESVIKSLYSDMPRQCSSCVVRFKCQEEHSKHMDWHVRKNRTA
KTVGRQGQQPKKSRGWLASASLWLSAATGGGMEQAAKPSFGGETQKKKEEQKQLVVPADE
NQKNCALCEEPFEEFFSHEDDDWMYKDAVYYNKDGRIVHAKCMPETRPAKESRELPRVAS
VTVPPVASAIVC
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaccggttccttctctaatcaaagaaacgcaccattccaaaacgcaaacgct
ggagcgacgctgaagagaggaatcaacgacaatcgcggttacggaggcggacattatcaa
gaggagcggaaccgttacgcgccgcctcagaaacgtttcagatcgcaaccgcaaccacaa
ccacaacaacaacagacgcagttccgatctggcaagattcctctgtatcatcatcctcat
ggtagtagtaataataacatgtctagggtttcttctcaatcatataacaattacggtgtt
gatgtgattgcttctaattcaagttttccattacgtaacaatgtttcttctaacaccaac
aattatcagaaaccctttgttggttttggtaataaccctaacccccaaattgttccggtt
ccgttaccgtgtcgtaagctttacgatgatgtcgctttagattcgttgcccgaatgggtt
ccgactcatcagtctgtctcaagaaccctaactccaaattatcctgttccaacaacgaat
tttgtgccaaacacaactgttcaagcacctgttttaacgaattattcgaacatggcttcg
gttgtgtcacaatctatgtctcaaccaattgttttgagcaaacaattgatagcgttgctt
agtgttcttaacaatgagaaagagaaagagaagccaacttcagaagcaagtaaacccggt
gaattgcctcttgggttaagctttgataacccatcatcactcaatgtgcgacacgaatct
gtgattaagtctttgtactctgatatgccgaggcaatgttcatcgtgcgtggttagattc
aagtgtcaagaagagcatagcaagcatatggattggcatgtgaggaagaacaggacggct
aaaaccgttgggagacagggtcaacagccgaagaagtcgcggggatggctagcgagtgct
tccttgtggcttagtgcagcaactggaggagggatggaacaagcggcgaaaccatctttt
ggaggagaaacgcagaagaagaaggaagagcaaaagcaactcgtagtgcctgcggatgaa
aaccagaagaattgcgcgttgtgtgaagagccgtttgaagagttctttagccatgaagat
gatgattggatgtacaaagatgcagtgtactacaacaaggatggtcgtatagttcatgca
aaatgtatgcctgaaacccgacctgcaaaggaatcgagagagctgccgagggtagcgtct
gttacagttccaccggttgcgagtgcaatagtctgttga
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