Camelina sativa (false flax): 104705917
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Entry
104705917 CDS
T05044
Name
(RefSeq) trafficking protein particle complex subunit 8-like isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104705917
Membrane trafficking [BR:
csat04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
104705917
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
104705917
NCBI-ProteinID:
XP_010420315
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Position
8:complement(3265973..3274662)
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AA seq
1273 aa
AA seq
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MVEPVNSSLGKMLLDEVSPVVMVLCTPLVEETFLKNGLSFVETLXXFFFFCCGAVPVRTS
SDQLYRLKKFTLRLFYASDIRQPNVEVAKQRLEQVISLAGEKDFQDLKSDPPQITDILSN
PESEIAPTWFQYYNKELIRTLSFSDHEAFDHPVACLLVVSSKDEEPIHKFVHLFNTNRLP
NDGVMNPNILKHYLLVHDNQDATTERTSKVLSEMRSQFGNNECNLLCTNSSKEGNVEHQS
NPWASFKSSVSADKLGCALTGDDIVEIKDLMQEFASRHIIPYMEQKVRELNQQISATRKG
LRNQIKNLWWRKGKDEGPDATKGSMYTFSSTESQIRILGDYAFMLHDYELALSSYRLIST
DYKLDKAWKHYAGVQEMMGLAYFISDQSKKEAEYCMENAFSTYMKLGKSGFQNATRCGLW
WAEMLKARDQHKEAASVYFRICGEEPLHAAVMLEQASYCFVLTKPAMLHKYGFHLVLSGD
HYKSCDQVNHAIRTYRSAISVYKSTTWSHIKDHVYFHIGQWYAIVGMHDVAVRNMLKVLD
CGYQSKATQEIFLRDFFNIVKKTGMKHEVVGLQLPVINMSSLQVIFEDHRTYASQASALV
EESIWQSLEDDIIPSLNSGKSNWLELQSKLLPKKYKESNVCVAGESVKVDLEFRNPLLIS
TSITSVSLICELSANSDDLKLVDNEPSSSSLGPESSTGHNQVTTSGVSSFTLSEVDFTLG
GGEKKLVRLTVTPGEEGILKIVGVRWELSGSIVGVHYFQSVPVKAKTAKGRRKNKLTPTD
ALKFLVIKSLPRLEGSIDHLPEKLYAGDLRYLVLELRNKSESPIKNLKMKISHPRFVSPG
NYKEELTTKFPDCLKKGDEQNILQPETNRTSSVFAFPKDVSLQGDGSLRWPLWLRAATPG
TIYLYFTIYYEMENVSSIMKYRTLRMHYNLQVLPSLQTSFEITPSPSRLQEFLVRMDIVN
RANSDCFQIHQLSTVGCRWGISLLQPVDTILPSKSLLAGQALSCFFMIKDCRKSGTEDEK
NMSLPPSQTDVKLFTQDDDEKLFDIVNSPIASFHESERSCQGPSAQASANTVDFILISRL
EKSSNPSAVSDLPKIMSHHSCHNSIRSSSQLSWSLGGPRTIDHDFSTSLCEIKLKMVIRN
TSDGLSSVTINTIDCLPDAAVPTSSSGNQSGWRYVQPVTEEMKLTSDVMGSRLGKPPSSM
ESSPPFLWSGLSSTKVQIQPLSTTEIPLQISVFSPGIYDLSSYKLNWELSEHGSASSGIC
QGYPYYLTVLQSE
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccggtgaactcttcgcttgggaaaatgctcttggacgaagttagtccagtg
gttatggttctatgtacgccccttgttgaagagacgttcctcaagaatggtctatccttt
gtggagacgcttnnnntttttttttttttttgttgtggtgcagtgcctgttcggacatca
agcgatcagctttataggttaaagaaattcacattgagattgttttatgcctccgatatc
agacaaccaaacgttgaggttgcaaagcaacggctagaacaagttattagtctagctggg
gagaaggattttcaggatttaaaatctgaccctcctcaaattactgatatactctctaat
ccagagtctgaaatcgcacccacatggtttcagtattacaataaagaacttatacgtaca
ttgtccttttcagaccacgaagcttttgatcatcctgtggcttgtctcttggttgtttca
tcaaaagacgaagaacctatacataaatttgtacatcttttcaacaccaatagattacct
aatgatggtgtaatgaacccaaatattttgaagcattacttgttggtgcatgacaatcaa
gatgcaacaacagagagaacgtctaaagttctgtctgagatgagaagtcaatttgggaat
aatgaatgcaacttactttgcactaattcatctaaagaggggaacgtggaacatcagtct
aacccttgggcttcatttaaatcaagtgtttcggccgacaaacttggatgtgctctcact
ggtgacgatattgtggagatcaaagatctgatgcaagagtttgcttccaggcatattatt
ccttacatggagcagaaagttcgagaacttaatcaacagatttctgcaacaagaaaaggt
ctaagaaaccagataaaaaacttatggtggagaaaaggaaaagacgaaggtccggatgcg
accaaaggttcaatgtatacctttagctccactgaatctcaaattagaattttgggtgac
tacgccttcatgttgcatgattatgaacttgcgttgtcaagctatcggttaatatcaaca
gattacaagcttgataaagcttggaagcactatgctggtgttcaggaaatgatgggactt
gcatatttcatctcagaccagtcaaaaaaggaagctgagtactgcatggaaaatgcattt
agcacttatatgaaacttgggaagtctggcttccaaaatgctacgagatgtgggctctgg
tgggcagagatgctaaaggctagagatcagcacaaagaagctgcttctgtttacttccgc
atatgtggagaggaacccttgcacgctgcagtcatgttggagcaagcttcttactgcttc
gtgttaactaagccagcgatgctacacaagtatggatttcatctagttctctcaggagac
cactataaaagttgtgatcaggttaaccatgcaattcgtacatacagaagtgcaatctct
gtttataaatcaactacatggagccatattaaagaccatgtatattttcatattggacaa
tggtatgcaattgttgggatgcatgatgttgcagttagaaacatgctcaaagtactggac
tgtggctaccaatctaaggcaacccaagagatttttctcagggactttttcaacattgtt
aagaaaactggaatgaagcatgaggtggtgggacttcaacttccagttattaacatgtcg
tctcttcaagttatatttgaagaccatcgcacttatgcatctcaagcttctgctcttgta
gaagagagcatctggcaatcactggaagatgatatcattccatcattaaattctggcaag
tcaaactggctggagctacagtcaaagcttctgccaaaaaaatacaaagaatcaaatgtt
tgtgtcgctggagagtcagtgaaagtggatctggagtttaggaatccattgctaatttct
acttccataacaagcgtgtctctcatctgtgaactttccgcaaattctgatgacctaaaa
ttagtagataatgagccaagtagctcaagcttgggtcctgagagttccacaggacataat
caggttacaacctctggtgtttcttctttcactttgtctgaagtggatttcacattaggt
ggaggcgagaaaaaattggtgagacttactgttacccctggtgaagaaggtatcctcaaa
attgtcggtgtaaggtgggagttgtctggctccatcgtaggtgtgcattacttccaatct
gtgcctgtaaaggcaaaaactgccaaaggaagaaggaaaaacaaacttacacccactgat
gccttgaagtttttagtcatcaagagtctacccaggcttgagggttcaattgatcatctg
cctgagaaattgtatgctggagatctacgttatcttgttttagagttgagaaataagtca
gaatccccaataaagaatcttaaaatgaaaattagccatccaagatttgtaagtcctgga
aactataaagaagagctgacaaccaaatttccagattgcttaaagaagggcgatgaacaa
aatattcttcagcctgaaacaaatagaacaagtagtgtatttgcatttccaaaggatgta
tcactgcaaggagacggatctttaaggtggcctctttggcttcgagctgccaccccagga
acgatatatttgtattttacaatatactatgagatggaaaatgtatcaagcatcatgaaa
taccgcaccctaaggatgcattataatttgcaggttttaccctctctacagacctcgttt
gaaatcaccccctctccatcaagattgcaagaatttcttgtgcgtatggatatcgtgaac
cgtgcgaattcagattgtttccaaattcaccagttgtcaacagttgggtgccggtggggc
atctcattgcttcagcctgttgatacaatcttaccttccaagtctctactcgctgggcaa
gctttatcatgtttctttatgataaaggattgcagaaaatccgggactgaagacgagaaa
aacatgtcccttcctcccagccaaactgacgtaaaattgtttactcaggacgatgatgaa
aagcttttcgatatcgttaactcacctatagcaagctttcatgaaagtgaaaggtcatgt
cagggaccctcagctcaggcaagtgcaaatactgttgacttcattctaatctctcgcctg
gaaaaaagcagcaatccgtcagcagtttctgatttaccaaagattatgtctcaccattca
tgtcacaatagtatcagaagctcgagccagctgtcgtggtcactaggcggtccccgaacc
atagaccacgacttttccacctccttgtgtgaaataaaactaaaaatggtaatcagaaac
acatctgatggattatcatctgtgaccatcaacaccattgattgtctaccagacgcagca
gtaccaacttcttcctctggaaaccaatccgggtggcgctacgtgcaacccgtaacagag
gaaatgaaactaacttcagatgtcatgggaagccgtctgggcaaaccgccatcttccatg
gaaagctcacctcctttcttatggtcaggtttaagttccacaaaggtccaaatccagcca
ttatccacaaccgagatcccgctgcagatatcagttttctctccaggtatctacgatctc
tcttcatataaacttaactgggagctttctgagcatggaagtgcatcatcagggatatgt
caaggatatccttattaccttactgttcttcagtctgagtga
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